Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j19f
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   1.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   3.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   3.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.4  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   3.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   5.9  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   5.9  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   7.8  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = -3

Query: 455 LNHPIHPIRKIKNXXXXXXXFPHATEELQTRFLLKYILLYYFVIDT*C 312
           L+H   P    +        FP   ++L  +FLL YI +   ++ + C
Sbjct: 334 LSHQSMPATGERQTLMFSATFPEEVQQLAGKFLLNYIFIAVGIVGSAC 381


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 521 KISESAMKEIQHFAANPPDLTHLNHPIHPI 432
           ++ E  + E   F+ N P L H ++ + P+
Sbjct: 48  RVKEEPIYESCRFSINQPYLNHFDNSVTPM 77


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 521 KISESAMKEIQHFAANPPDLTHLNHPIHPI 432
           ++ E  + E   F+ N P L H ++ + P+
Sbjct: 48  RVKEEPIYESCRFSINQPYLNHFDNSVTPM 77


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = -1

Query: 172 IFIIHGFVQIICSSIFILYV*S-----FCIFPYCISSHVSDDK 59
           I + H  +Q I S   ++ + S     FC   +CI  ++ DD+
Sbjct: 227 ILVTHNEIQTIFSVPLLMKIASQFVGIFCSLYFCIFGYIYDDE 269


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = -1

Query: 172 IFIIHGFVQIICSSIFILYV*S-----FCIFPYCISSHVSDDK 59
           I + H  +Q I S   ++ + S     FC   +CI  ++ DD+
Sbjct: 52  ILVTHNEIQTIFSVPLLMKIASQFVGIFCSLYFCIFGYIYDDE 94


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 153 NPWIMKIKKNVFRLDIPVPTIRTVAR 230
           NP I  +  N+    +P PTI T  R
Sbjct: 384 NPLINILYANMNSYSVPEPTISTTPR 409


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +3

Query: 447 MVEVSQVWRVSGKMLDLFHGAFRNFP*IWI 536
           ++EV ++ R+ G+M+ LF+  F  +P ++I
Sbjct: 215 VIEVRKLSRLLGEMVGLFNDIF-GWPLVFI 243


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -3

Query: 518 ISESAMKEIQHFAANPPDLTHLNHPIHPI 432
           + E  + E   F+ N P L H ++ + P+
Sbjct: 49  VKEEPIYESCRFSINQPYLNHFDNSVTPM 77


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 290 NLSFILLDIMYRLQNNII 343
           NL F+L+   + + NNII
Sbjct: 106 NLIFLLIQTRFEMINNII 123


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 204 VPTIRTVARMRVWVMRRNAFQ 266
           +PT+  +AR  +W   R A++
Sbjct: 151 MPTMEAIARSGIWENCRAAYE 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,187
Number of Sequences: 336
Number of extensions: 4026
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)