Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j14r
         (391 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    24   1.7  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   5.2  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    22   6.9  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    22   9.1  

>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +3

Query: 153 ITSCTEAWSLAWMRRLLAEHFLGQYKSTNSPASFCILYVC 272
           I+SC    +  +M R   + FLG +    +    C  + C
Sbjct: 514 ISSCCNPITYCFMNRRFRQAFLGVFSCYRNRMPICCCFCC 553


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 202 WPSISSGSTSQRIHRRRSAFYMSA 273
           WP     S  +R+ RRR  F+ S+
Sbjct: 288 WPRSRPTSKPKRLPRRRRPFFFSS 311


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 249 TPVNSLTCTARGNARPATASSTLR 178
           T V SLT   RGN   AT+   +R
Sbjct: 654 TAVRSLTDFTRGNTNMATSQVQIR 677


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 252 TTPVNSLTCTARGNARPATASSTLRTMLQY 163
           +T V +LT  ARG  +  +   TLR  ++Y
Sbjct: 130 STVVTALTNGARGANKKLSKVDTLRLAVEY 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,564
Number of Sequences: 2352
Number of extensions: 7428
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)