Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j12f
         (591 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069655-1|AAL39800.1| 1243|Drosophila melanogaster LD43035p pro...    29   3.6  
AY069506-1|AAL39651.1|  929|Drosophila melanogaster LD22666p pro...    29   3.6  
AE014297-1327|AAF54660.3| 1243|Drosophila melanogaster CG6791-PB...    29   3.6  
AE014297-1326|AAN13514.1| 1112|Drosophila melanogaster CG6791-PA...    29   3.6  

>AY069655-1|AAL39800.1| 1243|Drosophila melanogaster LD43035p
           protein.
          Length = 1243

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = +2

Query: 308 IH*YNTIVSTKMTVL----KRFRQCC*KIFKHTHIYLLKQRNTNIIWLCCK 448
           IH YNT+     T L    +R R+C  +I  H+   LLK + T++ + C K
Sbjct: 187 IHKYNTLRGLNFTPLDKLYQRCRECNKRIAMHSRENLLKHKFTHLPFRCTK 237


>AY069506-1|AAL39651.1|  929|Drosophila melanogaster LD22666p
           protein.
          Length = 929

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = +2

Query: 308 IH*YNTIVSTKMTVL----KRFRQCC*KIFKHTHIYLLKQRNTNIIWLCCK 448
           IH YNT+     T L    +R R+C  +I  H+   LLK + T++ + C K
Sbjct: 4   IHKYNTLRGLNFTPLDKLYQRCRECNKRIAMHSRENLLKHKFTHLPFRCTK 54


>AE014297-1327|AAF54660.3| 1243|Drosophila melanogaster CG6791-PB,
           isoform B protein.
          Length = 1243

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = +2

Query: 308 IH*YNTIVSTKMTVL----KRFRQCC*KIFKHTHIYLLKQRNTNIIWLCCK 448
           IH YNT+     T L    +R R+C  +I  H+   LLK + T++ + C K
Sbjct: 187 IHKYNTLRGLNFTPLDKLYQRCRECNKRIAMHSRENLLKHKFTHLPFRCTK 237


>AE014297-1326|AAN13514.1| 1112|Drosophila melanogaster CG6791-PA,
           isoform A protein.
          Length = 1112

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = +2

Query: 308 IH*YNTIVSTKMTVL----KRFRQCC*KIFKHTHIYLLKQRNTNIIWLCCK 448
           IH YNT+     T L    +R R+C  +I  H+   LLK + T++ + C K
Sbjct: 187 IHKYNTLRGLNFTPLDKLYQRCRECNKRIAMHSRENLLKHKFTHLPFRCTK 237


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,958,782
Number of Sequences: 53049
Number of extensions: 404422
Number of successful extensions: 828
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)