Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11j11r
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 281 5e-76
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 281 5e-76
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 271 3e-73
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 271 4e-73
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 270 5e-73
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 269 1e-72
U80451-10|AAB37844.1| 106|Caenorhabditis elegans Hypothetical p... 75 4e-14
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 30 1.8
Z82072-2|CAB04921.1| 329|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81029-8|CAB02702.1| 329|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 27 9.8
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 281 bits (688), Expect = 5e-76
Identities = 128/196 (65%), Positives = 153/196 (78%)
Frame = -2
Query: 698 EXELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFL 519
+ EL G ++PL GM+KE Q QLI DHFLFKEGDRFLQAANACR+WP GRGI+HN KTFL
Sbjct: 164 DPELAGKYFPLDGMTKEIQDQLIKDHFLFKEGDRFLQAANACRYWPKGRGIFHNNQKTFL 223
Query: 518 VWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTV 339
+WCNEEDHLRIISMQ GG++ QV +RL+ V IEK+ PFS DRLG+LTFCP+NLGTTV
Sbjct: 224 IWCNEEDHLRIISMQEGGNVGQVLERLIKGVKTIEKQAPFSRDDRLGWLTFCPSNLGTTV 283
Query: 338 RASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAV 159
RASVHI + + LQ+RG GEH+E+EGGVYDISNK R+GLTE++AV
Sbjct: 284 RASVHI-RLPKISAKPDFKSICDGLKLQIRGIHGEHSESEGGVYDISNKARLGLTEFEAV 342
Query: 158 KEMYDGIAELIKIEKS 111
K+MYDGIA LI +EK+
Sbjct: 343 KQMYDGIAHLIALEKA 358
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 281 bits (688), Expect = 5e-76
Identities = 128/196 (65%), Positives = 153/196 (78%)
Frame = -2
Query: 698 EXELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFL 519
+ EL G ++PL GM+KE Q QLI DHFLFKEGDRFLQAANACR+WP GRGI+HN KTFL
Sbjct: 201 DPELAGKYFPLDGMTKEIQDQLIKDHFLFKEGDRFLQAANACRYWPKGRGIFHNNQKTFL 260
Query: 518 VWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTV 339
+WCNEEDHLRIISMQ GG++ QV +RL+ V IEK+ PFS DRLG+LTFCP+NLGTTV
Sbjct: 261 IWCNEEDHLRIISMQEGGNVGQVLERLIKGVKTIEKQAPFSRDDRLGWLTFCPSNLGTTV 320
Query: 338 RASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAV 159
RASVHI + + LQ+RG GEH+E+EGGVYDISNK R+GLTE++AV
Sbjct: 321 RASVHI-RLPKISAKPDFKSICDGLKLQIRGIHGEHSESEGGVYDISNKARLGLTEFEAV 379
Query: 158 KEMYDGIAELIKIEKS 111
K+MYDGIA LI +EK+
Sbjct: 380 KQMYDGIAHLIALEKA 395
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 271 bits (665), Expect = 3e-73
Identities = 124/195 (63%), Positives = 151/195 (77%)
Frame = -2
Query: 698 EXELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFL 519
+ ELKGT+YPL GMSK+TQ QLI DHFLFKEGDR LQ ANAC FWP GRGI+HN KTFL
Sbjct: 176 DEELKGTYYPLDGMSKDTQNQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNNKKTFL 235
Query: 518 VWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTV 339
+W NEEDHLRIISMQ G D+ V +RL+ V IEK++ FS DRLG+LTFCPTNLG+TV
Sbjct: 236 IWVNEEDHLRIISMQEGSDVGAVLERLIKGVRGIEKQVQFSRDDRLGWLTFCPTNLGSTV 295
Query: 338 RASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAV 159
RASVHI +++ K LQ+RG GEH+E+EGGVYDISN+ R+GL+EY+AV
Sbjct: 296 RASVHI-ALPKLSAREDFKQICDKLDLQLRGIHGEHSESEGGVYDISNRARLGLSEYEAV 354
Query: 158 KEMYDGIAELIKIEK 114
K+MYDG+ LI++E+
Sbjct: 355 KKMYDGVKNLIEMEE 369
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 271 bits (664), Expect = 4e-73
Identities = 122/196 (62%), Positives = 156/196 (79%)
Frame = -2
Query: 698 EXELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFL 519
+ ELKGT+YPLTGM +ET+++LI DHFLFKEGDRFL+AANA R+WP GRGI+HNE KTFL
Sbjct: 164 DPELKGTYYPLTGMDEETKKKLIADHFLFKEGDRFLKAANANRYWPNGRGIFHNEKKTFL 223
Query: 518 VWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTV 339
VW NEEDHLRIISMQ GG++ +V RL+ +N + K PF+ H RLG+LTFCPTNLGTTV
Sbjct: 224 VWVNEEDHLRIISMQNGGNVGEVLARLIKGLNLVAAKAPFARHPRLGWLTFCPTNLGTTV 283
Query: 338 RASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAV 159
RASVHI +++ S LQ+RG GEH+E++ G+YDISNK+R+GLTEY AV
Sbjct: 284 RASVHI-KLPKISAKDDFKKICSDMKLQIRGIHGEHSESKEGIYDISNKQRLGLTEYQAV 342
Query: 158 KEMYDGIAELIKIEKS 111
++MYDG+ +LI++EK+
Sbjct: 343 RQMYDGLKKLIELEKA 358
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 270 bits (663), Expect = 5e-73
Identities = 124/195 (63%), Positives = 151/195 (77%)
Frame = -2
Query: 698 EXELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFL 519
+ ELKG +YPL GM K+TQ+QLI DHFLFKEGDR LQ ANAC FWP GRGI+HN +KTFL
Sbjct: 203 DKELKGKYYPLDGMGKDTQKQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNNDKTFL 262
Query: 518 VWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTV 339
+W NEEDH+RIISMQ G D+ V RL+ V IEK++PFS DRLG+LTFCPTNLG+TV
Sbjct: 263 IWVNEEDHMRIISMQEGSDVGAVLDRLIKGVRGIEKQVPFSRDDRLGWLTFCPTNLGSTV 322
Query: 338 RASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAV 159
RASVHI + E+ K +LQVRG GEH+E+ GGVYDISNK R+GL+EY AV
Sbjct: 323 RASVHIALPKLAARKDFI-EICEKLNLQVRGIHGEHSESVGGVYDISNKARLGLSEYQAV 381
Query: 158 KEMYDGIAELIKIEK 114
K+MYDG+ +LI++E+
Sbjct: 382 KQMYDGVKKLIEMEE 396
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 269 bits (660), Expect = 1e-72
Identities = 123/195 (63%), Positives = 151/195 (77%)
Frame = -2
Query: 698 EXELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFL 519
+ ELKG +YPL GM K+TQ+QLI DHFLFKEGDR LQ ANAC FWP GRGI+HN +KTFL
Sbjct: 231 DKELKGKYYPLDGMGKDTQKQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNNDKTFL 290
Query: 518 VWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTV 339
+W NEEDH+RIISMQ G D+ V RL+ V IEK++PFS DRLG+LTFCPTNLG+TV
Sbjct: 291 IWVNEEDHMRIISMQEGSDVGAVLDRLIKGVRGIEKQVPFSRDDRLGWLTFCPTNLGSTV 350
Query: 338 RASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDAV 159
RASVHI + E+ K +LQVRG GEH+++ GGVYDISNK R+GL+EY AV
Sbjct: 351 RASVHIALPKLAARKDFI-EICEKLNLQVRGIHGEHSDSVGGVYDISNKARLGLSEYQAV 409
Query: 158 KEMYDGIAELIKIEK 114
K+MYDG+ +LI++E+
Sbjct: 410 KQMYDGVKKLIEMEE 424
>U80451-10|AAB37844.1| 106|Caenorhabditis elegans Hypothetical
protein F11G11.13 protein.
Length = 106
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/76 (43%), Positives = 55/76 (72%)
Frame = -2
Query: 347 TTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEY 168
T++++SVHI +++ S+ LQ+RG GE+++ + G+YDISNK+R+GLTEY
Sbjct: 24 TSLKSSVHIKLPKISAKDDF-KKICSEMKLQIRGIHGEYSDLKEGIYDISNKQRLGLTEY 82
Query: 167 DAVKEMYDGIAELIKI 120
AV++MYDG+ +LI++
Sbjct: 83 QAVRQMYDGLKKLIEL 98
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 456 AGIQEAGERRQRDREEDPVLAPRPARLPHVLPDQ 355
AG E E++ + E DP PRP P P+Q
Sbjct: 279 AGDHERKEKKPKKEERDPAAPPRPRGRPPKTPEQ 312
>Z82072-2|CAB04921.1| 329|Caenorhabditis elegans Hypothetical
protein W05H12.2 protein.
Length = 329
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 404 PFSHHDRLGFLTFCPTNLGTTVRASVH 324
P H DRL LTFC + T V +H
Sbjct: 194 PVRHRDRLALLTFCDIDTQTIVLWRIH 220
>Z81029-8|CAB02702.1| 329|Caenorhabditis elegans Hypothetical
protein W05H12.2 protein.
Length = 329
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 404 PFSHHDRLGFLTFCPTNLGTTVRASVH 324
P H DRL LTFC + T V +H
Sbjct: 194 PVRHRDRLALLTFCDIDTQTIVLWRIH 220
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 461 LQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTN--LGTT 342
L ++ + + E++ P HDR L FCP N +GTT
Sbjct: 1058 LNEIELKEKGCILEVDLDYPVELHDRHNDLPFCPENKLVGTT 1099
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,118,858
Number of Sequences: 27780
Number of extensions: 196454
Number of successful extensions: 716
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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