Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j11r
         (702 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   358   e-101
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   122   3e-30
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   3.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.7  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    22   6.5  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  358 bits (881), Expect = e-101
 Identities = 166/198 (83%), Positives = 180/198 (90%)
 Frame = -2

Query: 701 LEXELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTF 522
           LE ELKGTFYPLTGMSKETQQ+LIDDHFLFKEGDRFLQAANACRFWPTGRGIYHN++KTF
Sbjct: 158 LEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNDDKTF 217

Query: 521 LVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTT 342
           LVWCNEEDHLRIISMQMGGDL QVY+RLV AVNEIEK++ FSH+DRLGFLTFCPTNLGTT
Sbjct: 218 LVWCNEEDHLRIISMQMGGDLGQVYRRLVHAVNEIEKRLLFSHNDRLGFLTFCPTNLGTT 277

Query: 341 VRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYDA 162
           VRASVHI           LEE+A K++LQVRGTRGEHTEAEGG+YDISNKRR+GLTEY A
Sbjct: 278 VRASVHIKLPKLAANRAKLEEIAGKFNLQVRGTRGEHTEAEGGIYDISNKRRLGLTEYQA 337

Query: 161 VKEMYDGIAELIKIEKSL 108
           VKEM+DGIAELIK+EK L
Sbjct: 338 VKEMHDGIAELIKLEKEL 355


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  122 bits (295), Expect = 3e-30
 Identities = 54/59 (91%), Positives = 57/59 (96%)
 Frame = -2

Query: 701 LEXELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKT 525
           LE ELKGTFYPLTGMSKETQQ+LIDDHFLFKEGDRFLQAANA RFWPTGRGIYHN++KT
Sbjct: 142 LEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANAXRFWPTGRGIYHNDDKT 200


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = -1

Query: 468 WRPAAGIQEAGERRQRDREEDPVLAPRPARLPHVLPDQPGHH 343
           W+ A G +       R+R    +L+     L HV  D+ G +
Sbjct: 743 WKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREGFY 784


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = -1

Query: 468 WRPAAGIQEAGERRQRDREEDPVLAPRPARLPHVLPDQPGHH 343
           W+ A G +       R+R    +L+     L HV  D+ G +
Sbjct: 739 WKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREGFY 780


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +1

Query: 562 GQKRQALAACRKR-SPSLNRKWSSMSCCWV 648
           G K   ++AC     P + +K    +CCWV
Sbjct: 440 GTKDIPISACSLPCEPGMIKKQQGDTCCWV 469


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +1

Query: 562 GQKRQALAACRKR-SPSLNRKWSSMSCCWV 648
           G K   ++AC     P + +K    +CCWV
Sbjct: 530 GTKDIPISACSLPCEPGMIKKQQGDTCCWV 559


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 569 FWPTGRGIYHNENKTFLVWCNEEDHLRIISMQM 471
           F+  GRGI + + K   V  +++ H++I    M
Sbjct: 99  FFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGM 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,055
Number of Sequences: 438
Number of extensions: 2548
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)