Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11j11f
(617 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 236 8e-63
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 231 4e-61
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 230 7e-61
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 228 2e-60
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 227 4e-60
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 209 1e-54
AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical ... 76 2e-14
U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical pr... 31 0.87
U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical... 30 1.2
U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead transc... 29 3.5
U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead transc... 29 3.5
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 29 3.5
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 3.5
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 29 3.5
Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical p... 28 4.6
AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical ... 28 4.6
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 27 8.1
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 27 8.1
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 27 8.1
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 27 8.1
AC006777-4|AAK72310.1| 333|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 236 bits (578), Expect = 8e-63
Identities = 112/183 (61%), Positives = 146/183 (79%), Gaps = 4/183 (2%)
Frame = +2
Query: 80 EKLEAGFSKLQG-SDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGI 256
+ +E ++KLQG SD SLLKK+LT++V K+KKT G+TLLD IQSG ENLDSGVGI
Sbjct: 9 KSIEEVYTKLQGASDCSSLLKKHLTKDVVAKNKSKKTRLGATLLDVIQSGGENLDSGVGI 68
Query: 257 YAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGD--VDTLGNLDPAGEFVVSTRV 430
YAPDAESY++FA+LF+P+IE+YHNGFK TD P + G+ V L +LDP G+F+VSTR+
Sbjct: 69 YAPDAESYTLFADLFNPVIEEYHNGFKATDTQPAMDLGEKNVGELADLDPEGKFIVSTRI 128
Query: 431 RCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSL-EGELKGTFYPLTGMSKETQQQLIDD 607
RCGRSL+GYPFNPCL+E+ YK ME ++ +S+ + ELKGT+YPLTGM +ET+++LI D
Sbjct: 129 RCGRSLQGYPFNPCLSETNYKMMETRMKEIFNSITDPELKGTYYPLTGMDEETKKKLIAD 188
Query: 608 HFL 616
HFL
Sbjct: 189 HFL 191
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 231 bits (564), Expect = 4e-61
Identities = 113/196 (57%), Positives = 144/196 (73%), Gaps = 6/196 (3%)
Frame = +2
Query: 47 KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 217
+A + VDAAT++K+E ++KL G + KSLLKK+LT+EV + LK K+T G+TL DCI
Sbjct: 64 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKEVVEKLKTKRTKVGATLYDCI 123
Query: 218 QSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGN 391
+SGV NLD+GVG+YAPDAE+Y++FA LFD IIEDYH GF K PP + G+ T
Sbjct: 124 RSGVYNLDAGVGVYAPDAEAYTLFAPLFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPP 182
Query: 392 LDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSL-EGELKGTFYPLT 568
LDP G+++ STR+RCGRSL+GYPFNPCLT+ Y EME KV S + ELKG +YPL
Sbjct: 183 LDPKGKYIKSTRIRCGRSLKGYPFNPCLTQDNYLEMEGKVKKAFSEYSDKELKGKYYPLD 242
Query: 569 GMSKETQQQLIDDHFL 616
GM K+TQ+QLI DHFL
Sbjct: 243 GMGKDTQKQLIADHFL 258
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 230 bits (562), Expect = 7e-61
Identities = 112/196 (57%), Positives = 144/196 (73%), Gaps = 6/196 (3%)
Frame = +2
Query: 47 KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 217
+A + VDAAT++K+E ++KL G + KSLLKK+LT++V + LK K+T G+TL DCI
Sbjct: 36 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKDVVEKLKTKRTKLGATLYDCI 95
Query: 218 QSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGN 391
+SGV NLD+GVG+YAPDAE+Y++FA LFD IIEDYH GF K PP + G+ T
Sbjct: 96 RSGVYNLDAGVGVYAPDAEAYTLFAPLFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPP 154
Query: 392 LDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSL-EGELKGTFYPLT 568
LDP G+++ STR+RCGRSL+GYPFNPCLT+ Y EME KV S + ELKG +YPL
Sbjct: 155 LDPKGKYIKSTRIRCGRSLKGYPFNPCLTQDNYLEMEGKVKKAFSEYSDKELKGKYYPLD 214
Query: 569 GMSKETQQQLIDDHFL 616
GM K+TQ+QLI DHFL
Sbjct: 215 GMGKDTQKQLIADHFL 230
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 228 bits (558), Expect = 2e-60
Identities = 111/199 (55%), Positives = 144/199 (72%), Gaps = 4/199 (2%)
Frame = +2
Query: 32 CSSARKAATMVDAATLEKLEAGFSKLQGS-DSKSLLKKYLTREVFDSLKNKKTSFGSTLL 208
C A++ + V + K+E G++KLQ + + SLLKKYLT+EV D LK+KKT G+ LL
Sbjct: 31 CVQAQEGMS-VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLL 89
Query: 209 DCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT-- 382
D IQSGV NLDSGVG+YAPDAE+Y++F LFDP+I+DYHNGF K P + G+ T
Sbjct: 90 DVIQSGVANLDSGVGVYAPDAEAYTLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSA 149
Query: 383 LGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSL-EGELKGTFY 559
L +LDP G+F+ STR+RCGRSL+GYPFNPCL+E+ Y EME KV ++ + EL G ++
Sbjct: 150 LVDLDPEGKFINSTRIRCGRSLQGYPFNPCLSEANYLEMESKVKAIFDNITDPELAGKYF 209
Query: 560 PLTGMSKETQQQLIDDHFL 616
PL GM+KE Q QLI DHFL
Sbjct: 210 PLDGMTKEIQDQLIKDHFL 228
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 227 bits (556), Expect = 4e-60
Identities = 109/189 (57%), Positives = 139/189 (73%), Gaps = 4/189 (2%)
Frame = +2
Query: 62 VDAATLEKLEAGFSKLQGS-DSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 238
V + K+E G++KLQ + + SLLKKYLT+EV D LK+KKT G+ LLD IQSGV NL
Sbjct: 3 VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANL 62
Query: 239 DSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEF 412
DSGVG+YAPDAE+Y++F LFDP+I+DYHNGF K P + G+ T L +LDP G+F
Sbjct: 63 DSGVGVYAPDAEAYTLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKF 122
Query: 413 VVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSL-EGELKGTFYPLTGMSKETQ 589
+ STR+RCGRSL+GYPFNPCL+E+ Y EME KV ++ + EL G ++PL GM+KE Q
Sbjct: 123 INSTRIRCGRSLQGYPFNPCLSEANYLEMESKVKAIFDNITDPELAGKYFPLDGMTKEIQ 182
Query: 590 QQLIDDHFL 616
QLI DHFL
Sbjct: 183 DQLIKDHFL 191
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 209 bits (510), Expect = 1e-54
Identities = 106/191 (55%), Positives = 130/191 (68%), Gaps = 6/191 (3%)
Frame = +2
Query: 62 VDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVE 232
VD T++K+E + L G D SLLKK LT++V + LK K T G+ L DCI+SGV
Sbjct: 14 VDPVTIKKIEEAYVMLNGPDGAKCSSLLKKNLTKDVIEKLKTKSTKLGANLYDCIRSGVY 73
Query: 233 NLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAG 406
LD+ VG+YAPDAE+Y++FA LFD IIEDYH G K PP + G+ T LDP G
Sbjct: 74 CLDALVGVYAPDAEAYTLFAPLFDKIIEDYH-GLGPDQKQPPVDLGEGKTKEFPPLDPKG 132
Query: 407 EFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSL-EGELKGTFYPLTGMSKE 583
+++ STR+RCGRSL GY FNPCLTE Y EME+KV S + ELKGT+YPL GMSK+
Sbjct: 133 KYIKSTRIRCGRSLNGYQFNPCLTEDNYLEMEEKVKKAFSEFSDEELKGTYYPLDGMSKD 192
Query: 584 TQQQLIDDHFL 616
TQ QLI DHFL
Sbjct: 193 TQNQLIADHFL 203
>AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical
protein K04F1.1 protein.
Length = 244
Score = 75.8 bits (178), Expect = 2e-14
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Frame = +2
Query: 47 KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 217
+A + VDAAT++K+E + KL G + KSLL+KYLT+++ + LK K T G+++ DCI
Sbjct: 86 QAKSEVDAATIKKIEEAYVKLNGPEGAKCKSLLRKYLTKDIVEKLKTKCTKLGASVYDCI 145
Query: 218 QSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLD 397
+G+ + G+ F LF+ IED++ GF +K PP + G+
Sbjct: 146 LTGLRFVRQGLR-----------FVALFNKNIEDFY-GFSPKEKQPPVDLGE-------- 185
Query: 398 PAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSL-EGELKGTFYPL 565
G++ E P +P + Y EME KV S ELK +YPL
Sbjct: 186 -------------GKTKEFPPLDPNGNQENYLEMEGKVKRDFSEYSHKELKRKYYPL 229
>U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical
protein T03G11.3 protein.
Length = 349
Score = 30.7 bits (66), Expect = 0.87
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 102 ASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVSRTWTPASVST--RRTPS 275
AS+R +LS R TLP ++ R+ D P +S R TPAS +T R+ S
Sbjct: 257 ASNRHTSLSAGMRPTLPPMTPSSKRSSSAKRDAPLQQSSTPQQRLKTPASTTTTASRSGS 316
Query: 276 RT 281
RT
Sbjct: 317 RT 318
>U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical
protein C18F3.4 protein.
Length = 306
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 156 KYSTA*RTKRPHSDPPSLTAS---NRVSRTWTPASVSTRRTP 272
K S R PHS P++++S N + +WTP+++S TP
Sbjct: 88 KLSPPRRQSNPHSSLPAISSSTVKNEPTDSWTPSALSNDPTP 129
>AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical
protein Y73B3A.7 protein.
Length = 205
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 477 VRQGLKGYPSSERPQRTRVETTNSPAGSRLP-SVSTSPQFLGGCLSV 340
VR+ + GY + + ++++TN+P SRLP + Q LGG L +
Sbjct: 47 VRKSIMGYRGKRKTDQ-QLKSTNNPTSSRLPLNTKNVAQALGGRLHI 92
>U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform b protein.
Length = 592
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -3
Query: 396 SRLPSVSTSPQFLGGCLSVFLKPLW*SSMIGSNSSANTEYDSASGA*IPTPESKFSTP 223
S +PSVS+ P FL LS +P + S SAS P P+SK P
Sbjct: 290 STVPSVSSMPSFLNHQLSTSSQPSSQQASGSSGPLLQRAASSASTETSPNPDSKSFVP 347
>U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform a protein.
Length = 778
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -3
Query: 396 SRLPSVSTSPQFLGGCLSVFLKPLW*SSMIGSNSSANTEYDSASGA*IPTPESKFSTP 223
S +PSVS+ P FL LS +P + S SAS P P+SK P
Sbjct: 476 STVPSVSSMPSFLNHQLSTSSQPSSQQASGSSGPLLQRAASSASTETSPNPDSKSFVP 533
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 35 SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 214
+SA +AA + + +L A + + S+++ K T+ FDSLK + F + D
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589
Query: 215 I 217
+
Sbjct: 590 V 590
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 35 SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 214
+SA +AA + + +L A + + S+++ K T+ FDSLK + F + D
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589
Query: 215 I 217
+
Sbjct: 590 V 590
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 35 SSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 214
+SA +AA + + +L A + + S+++ K T+ FDSLK + F + D
Sbjct: 530 ASAAQAAINAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDS 589
Query: 215 I 217
+
Sbjct: 590 V 590
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 186 PHSDPPSLTASNRVSRTW---TPASVSTRRTPSRTPCSP 293
P + S T + R +TW TP + +TR+TP T P
Sbjct: 382 PTTQTSSTTQTPRTKQTWAPWTPPTTTTRQTPPTTQAPP 420
>Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 549 PLSSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPA 400
P P R ++ E S+S +S +G+K + RP RTR+ NSP+
Sbjct: 424 PPFEPERQEKTQEMRKSMS---NSAEEGVK---KNRRPVRTRIRNGNSPS 467
>Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 549 PLSSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPA 400
P P R ++ E S+S +S +G+K + RP RTR+ NSP+
Sbjct: 424 PPFEPERQEKTQEMRKSMS---NSAEEGVK---KNRRPVRTRIRNGNSPS 467
>AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical
protein Y51H1A.2 protein.
Length = 604
Score = 28.3 bits (60), Expect = 4.6
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +2
Query: 32 CSSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVF--DSLKNKKTSFGSTL 205
CSS +M+D+ + A L+GS S S+ + +++ S T ST+
Sbjct: 277 CSSVYSHPSMLDSGEMSYQHAVLGGLKGSSSSSMRRVASNQKIQLPQSPLFSSTPVDSTI 336
Query: 206 LDCIQSGVEN--LD--SGVGIYAPDA 271
LD ++ G N LD V APDA
Sbjct: 337 LDQVKIGKANSRLDFVQTVSDVAPDA 362
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 70 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 180
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 391 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 428
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 70 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 180
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 454 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 491
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 70 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 180
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 432 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 469
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 27.5 bits (58), Expect = 8.1
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = -3
Query: 549 PLSSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTS 370
PLS P R R+P+ S S Y P + P R V + S P++ST+
Sbjct: 250 PLSIPRRPARIPDGAPSSSSYLAPAVPARAPPPVPQSPLRVNVR-DSLEGSSSTPALSTT 308
Query: 369 ----PQFLGGCLSVFLKPLW*SSMIGSNSSAN 286
LG + P+ +++GS+SS +
Sbjct: 309 RPTIDDLLGEIIPSTPPPVAPRAVLGSSSSTS 340
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 27.5 bits (58), Expect = 8.1
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = -3
Query: 549 PLSSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTS 370
PLS P R R+P+ S S Y P + P R V + S P++ST+
Sbjct: 430 PLSIPRRPARIPDGAPSSSSYLAPAVPARAPPPVPQSPLRVNVR-DSLEGSSSTPALSTT 488
Query: 369 ----PQFLGGCLSVFLKPLW*SSMIGSNSSAN 286
LG + P+ +++GS+SS +
Sbjct: 489 RPTIDDLLGEIIPSTPPPVAPRAVLGSSSSTS 520
>AC006777-4|AAK72310.1| 333|Caenorhabditis elegans Hypothetical
protein Y46H3D.7 protein.
Length = 333
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 488 YKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFL 616
++EM+D S LS + L TFY + M ++ QQ+L+ +FL
Sbjct: 122 FEEMDDVCSVDLSLVVETLVRTFYKMAPM-EDDQQRLLVKNFL 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,804,623
Number of Sequences: 27780
Number of extensions: 278963
Number of successful extensions: 1276
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -