Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j09f
         (456 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098993-8|AAC67465.2|  142|Caenorhabditis elegans Pterin carbin...   138   2e-33
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr...    31   0.53 
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr...    31   0.53 
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr...    31   0.53 
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr...    28   3.7  
AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical ...    27   6.5  
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical...    27   8.6  
AC024838-5|AAY43990.1|  301|Caenorhabditis elegans Hypothetical ...    27   8.6  

>AF098993-8|AAC67465.2|  142|Caenorhabditis elegans Pterin
           carbinolamine dehydrataseprotein 1 protein.
          Length = 142

 Score =  138 bits (334), Expect = 2e-33
 Identities = 60/96 (62%), Positives = 74/96 (77%)
 Frame = +2

Query: 29  RKMADKLNQEERTTELKPLLESGWKIQSNRDAIEKEFQFKNFNEAFGFMTRVALLAEKMD 208
           RK    L + ERT +L  L  +GWK+   RDAI+KEF FK+FNEAFGFMTRV L AEKMD
Sbjct: 42  RKKMPLLTESERTEQLSGLKTAGWKLVEGRDAIQKEFHFKDFNEAFGFMTRVGLKAEKMD 101

Query: 209 HHPEWFNVYNKLQVTLSSHDVNGLSKRDIKMASFMD 316
           HHPEWFNVYNK+ +TLS+HD  GLS  D+K+A+F++
Sbjct: 102 HHPEWFNVYNKVDITLSTHDCGGLSPNDVKLATFIE 137


>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
           protein R07G3.3c protein.
          Length = 1316

 Score = 30.7 bits (66), Expect = 0.53
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
 Frame = +2

Query: 71  ELKPLLESGWKIQSNRDAIEKEFQFKNFNEAFGFMTRVALLAEK----MDHHPEWFNVYN 238
           E+K L      ++ +++A+EKE Q   F E   + T  +L AE     M    E  N  +
Sbjct: 132 EIKKLTNEQASLRHSKEALEKEIQGIQF-ERQKYATERSLHAESKTWLMQEVSERDNKVS 190

Query: 239 KLQVTLSSHDVNGLSKR 289
            L++ LS+ D+ G ++R
Sbjct: 191 SLRLELSNKDIQGANER 207


>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
           protein R07G3.3a protein.
          Length = 1982

 Score = 30.7 bits (66), Expect = 0.53
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
 Frame = +2

Query: 71  ELKPLLESGWKIQSNRDAIEKEFQFKNFNEAFGFMTRVALLAEK----MDHHPEWFNVYN 238
           E+K L      ++ +++A+EKE Q   F E   + T  +L AE     M    E  N  +
Sbjct: 132 EIKKLTNEQASLRHSKEALEKEIQGIQF-ERQKYATERSLHAESKTWLMQEVSERDNKVS 190

Query: 239 KLQVTLSSHDVNGLSKR 289
            L++ LS+ D+ G ++R
Sbjct: 191 SLRLELSNKDIQGANER 207


>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
           protein R07G3.3b protein.
          Length = 1987

 Score = 30.7 bits (66), Expect = 0.53
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
 Frame = +2

Query: 71  ELKPLLESGWKIQSNRDAIEKEFQFKNFNEAFGFMTRVALLAEK----MDHHPEWFNVYN 238
           E+K L      ++ +++A+EKE Q   F E   + T  +L AE     M    E  N  +
Sbjct: 132 EIKKLTNEQASLRHSKEALEKEIQGIQF-ERQKYATERSLHAESKTWLMQEVSERDNKVS 190

Query: 239 KLQVTLSSHDVNGLSKR 289
            L++ LS+ D+ G ++R
Sbjct: 191 SLRLELSNKDIQGANER 207


>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
            C41A3.1 protein.
          Length = 7829

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 47   LNQEERTTELKPLLESGWKIQSNRDAIEKEF-QFKNFNE 160
            L Q ER   +K +  +GWK+  N+DAI   + QF   +E
Sbjct: 5162 LAQPERREIVKQIESNGWKLLPNQDAISVFYTQFMETHE 5200


>AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical
           protein F56H1.3 protein.
          Length = 1174

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = +2

Query: 26  KRKMADKLNQEERTTELKPLLESGWKIQSNRDAIEKEFQFKNFNEAFGFMTRVALLAEKM 205
           K+  A   N E+ +  L+P  E   KIQ+  +  E+ F F+   E      +  L  E +
Sbjct: 379 KKHFALGANTEQLSKALEPFYEISKKIQNLFNVWEEYFHFEKLEEKNKRFQKTTLKLETI 438

Query: 206 DHHPE 220
           + + E
Sbjct: 439 EQYVE 443


>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
            protein Y111B2A.14 protein.
          Length = 1481

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 29   RKMADKLNQEERTTELKPLLESGWKIQSNRDAIEKEFQFK 148
            RKM +      + TE +  +E+  K+   R A+E+E Q K
Sbjct: 1055 RKMREAEESARKETERRAKMETERKVAEARRAVERENQIK 1094


>AC024838-5|AAY43990.1|  301|Caenorhabditis elegans Hypothetical
           protein Y59E9AL.8 protein.
          Length = 301

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 166 KSFIKIFELKFLFYCVSVALNFPTRFQ*RFELSCAL 59
           KSFIKI +  FL   VS+A         RFE+SC L
Sbjct: 271 KSFIKIVQAHFLRITVSIASK-------RFEISCRL 299


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,159,529
Number of Sequences: 27780
Number of extensions: 192794
Number of successful extensions: 550
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)