Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j09f
         (456 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   1.2  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   4.8  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   4.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.4  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 94  WLENSEQQRRNRKGISVQK 150
           WLE  E +  + KGI++Q+
Sbjct: 594 WLEKREHRSSSTKGITIQE 612


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 195 LRKWIIILSGSMY 233
           L +W+ ILSG +Y
Sbjct: 305 LNEWLYILSGCLY 317


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 73  AQTSTGIWLENSEQQRRN 126
           + T+ G W EN   +RRN
Sbjct: 320 SDTALGCWNENRPLKRRN 337


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 400 FYPNHMFISLINIITPLYTKKK 335
           +Y   MF+S   I TPL +++K
Sbjct: 84  WYKQGMFLSRNAIFTPLNSEQK 105


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 400 FYPNHMFISLINIITPLYTKKK 335
           +Y   MF+S   I TPL +++K
Sbjct: 84  WYKQGMFLSRNAIFTPLNSEQK 105


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 245 QVTLSSHDVNGLSKRDIKMASFMDKNYN*TFF 340
           Q T+   D  G+   DIK+ +   +N   TF+
Sbjct: 421 QYTVQQLDFPGIEIADIKLTTNQQRNILNTFW 452


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,395
Number of Sequences: 438
Number of extensions: 2554
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)