Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j07f
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          28   0.054
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.2  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 28.3 bits (60), Expect = 0.054
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 293 KNITEGEPRYQVMPHDHSKKIAKYYYAS-EKTIEK 394
           K   E EP ++   +D SKK  +YYY S +  IEK
Sbjct: 218 KEEIEDEPDHKWKKNDSSKKKTRYYYRSVDDVIEK 252


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 113  VRSLERTLSSVVDLPQFQDGSIHNEPV 193
            +RSL R L  + D P  +D +   EPV
Sbjct: 984  LRSLNRGLGLIPDNPSREDCTKPPEPV 1010


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 455 VKIWQTAAELMAGAYRQSLNAATILGQSKSVI 550
           VKI   +      A    LN  TILG S +VI
Sbjct: 296 VKIVDASCRNFTAARFFELNRRTILGVSNAVI 327


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,133
Number of Sequences: 336
Number of extensions: 2472
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)