Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j07f
         (614 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       25   2.6  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   7.8  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 493 CVSTEPQCCDHTWTVE 540
           C +T+P+ C  +WT+E
Sbjct: 54  CDNTQPRICHFSWTME 69


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 150 STTLDNVRSSERTRPILAQIVSITLTLVNTE*RIN*QYVGPSPRDRDK 7
           +T ++ V+SSE       ++ SI  TL  T   IN     P P  R +
Sbjct: 350 NTLMNKVKSSEPVEQCPVKLKSIIETLFPTHPTINTPETDPVPITRQE 397


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,341
Number of Sequences: 2352
Number of extensions: 10757
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)