Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11j07f
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016672-3|AAT92072.1| 394|Caenorhabditis elegans Aldehyde dehy... 150 9e-37
AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde dehy... 150 9e-37
AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde dehy... 150 9e-37
AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde dehy... 39 0.003
AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde dehy... 39 0.003
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 29 2.0
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 29 2.0
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 29 2.0
Z82282-8|CAB05278.1| 575|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z82282-7|CAB05280.2| 584|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 28 4.6
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein. 28 4.6
U88314-5|AAF99882.1| 146|Caenorhabditis elegans Hypothetical pr... 28 6.1
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 28 6.1
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 28 6.1
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 6.1
U80453-7|AAN63451.1| 286|Caenorhabditis elegans Hypothetical pr... 27 8.1
U80453-6|AAK31447.1| 349|Caenorhabditis elegans Hypothetical pr... 27 8.1
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 27 8.1
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 27 8.1
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 27 8.1
>AF016672-3|AAT92072.1| 394|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform c protein.
Length = 394
Score = 150 bits (363), Expect = 9e-37
Identities = 75/143 (52%), Positives = 97/143 (67%)
Frame = +2
Query: 182 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDHSKKIAK 361
NEP+L YR GS+ERQDL L + I +VP+ I K IT + QV+P DH +AK
Sbjct: 34 NEPILEYRKGSKERQDLEAALAFYSKNITEVPLRIGDKKITNKLEQKQVIPSDHRSTLAK 93
Query: 362 YYYASEKTIEKAIQASVDAQTRWDRTPLTERVKIWQTAAELMAGAYRQSLNAATILGQSK 541
Y YA+ + I++AI ++ A+ W+R PL ER +I AA+L AG YR LNA+T+LGQ K
Sbjct: 94 YTYATGEQIQEAIDVALQARGAWERKPLKERAEILLRAADLAAGKYRMKLNASTMLGQGK 153
Query: 542 SVIQAEIDAAAELIDFFRFNVHF 610
++IQAEIDAA ELIDFFRFN F
Sbjct: 154 NIIQAEIDAACELIDFFRFNAVF 176
>AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform b protein.
Length = 512
Score = 150 bits (363), Expect = 9e-37
Identities = 75/143 (52%), Positives = 97/143 (67%)
Frame = +2
Query: 182 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDHSKKIAK 361
NEP+L YR GS+ERQDL L + I +VP+ I K IT + QV+P DH +AK
Sbjct: 34 NEPILEYRKGSKERQDLEAALAFYSKNITEVPLRIGDKKITNKLEQKQVIPSDHRSTLAK 93
Query: 362 YYYASEKTIEKAIQASVDAQTRWDRTPLTERVKIWQTAAELMAGAYRQSLNAATILGQSK 541
Y YA+ + I++AI ++ A+ W+R PL ER +I AA+L AG YR LNA+T+LGQ K
Sbjct: 94 YTYATGEQIQEAIDVALQARGAWERKPLKERAEILLRAADLAAGKYRMKLNASTMLGQGK 153
Query: 542 SVIQAEIDAAAELIDFFRFNVHF 610
++IQAEIDAA ELIDFFRFN F
Sbjct: 154 NIIQAEIDAACELIDFFRFNAVF 176
>AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform a protein.
Length = 563
Score = 150 bits (363), Expect = 9e-37
Identities = 75/143 (52%), Positives = 97/143 (67%)
Frame = +2
Query: 182 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDHSKKIAK 361
NEP+L YR GS+ERQDL L + I +VP+ I K IT + QV+P DH +AK
Sbjct: 34 NEPILEYRKGSKERQDLEAALAFYSKNITEVPLRIGDKKITNKLEQKQVIPSDHRSTLAK 93
Query: 362 YYYASEKTIEKAIQASVDAQTRWDRTPLTERVKIWQTAAELMAGAYRQSLNAATILGQSK 541
Y YA+ + I++AI ++ A+ W+R PL ER +I AA+L AG YR LNA+T+LGQ K
Sbjct: 94 YTYATGEQIQEAIDVALQARGAWERKPLKERAEILLRAADLAAGKYRMKLNASTMLGQGK 153
Query: 542 SVIQAEIDAAAELIDFFRFNVHF 610
++IQAEIDAA ELIDFFRFN F
Sbjct: 154 NIIQAEIDAACELIDFFRFNAVF 176
>AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform b protein.
Length = 430
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = +2
Query: 290 GKNIT-EGEPRYQVMPHDHSKKIAKYYYASEKTIEKAIQASVDAQTRWDRTPLTERVKIW 466
GK T E + V+ + +AK A+ +++ ++A+ DAQ+ W T +R K+
Sbjct: 18 GKRTTIESTETFDVIEPRIGQVVAKCPKATADIVDQYVKAAADAQSAWGETTALDRGKVL 77
Query: 467 QTAAELMAGAYRQSLNAATILGQSKSVIQAEIDAA--AELIDFF 592
A+L+ + + + + K + +A D A A+ DFF
Sbjct: 78 HKVADLIR-EHAEEIAIWEVKTNGKPIYEARCDIASSADTFDFF 120
>AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform a protein.
Length = 499
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = +2
Query: 290 GKNIT-EGEPRYQVMPHDHSKKIAKYYYASEKTIEKAIQASVDAQTRWDRTPLTERVKIW 466
GK T E + V+ + +AK A+ +++ ++A+ DAQ+ W T +R K+
Sbjct: 18 GKRTTIESTETFDVIEPRIGQVVAKCPKATADIVDQYVKAAADAQSAWGETTALDRGKVL 77
Query: 467 QTAAELMAGAYRQSLNAATILGQSKSVIQAEIDAA--AELIDFF 592
A+L+ + + + + K + +A D A A+ DFF
Sbjct: 78 HKVADLIR-EHAEEIAIWEVKTNGKPIYEARCDIASSADTFDFF 120
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 137 SSVVDLPQFQDGSIHNEPVLGYRAGSRERQ-DLIEELK-RTASVIEDVPIVIAGKNITEG 310
SS + PQ Q + E Y +G RQ + +E L+ TAS ++PI GKN T
Sbjct: 25 SSSIGPPQQQSAKLFPEHF--YPSGLSPRQSEALERLRPNTASRERNIPIQFTGKNPTTN 82
Query: 311 E--PRYQVMPH 337
Y+ +PH
Sbjct: 83 SALEEYKPVPH 93
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 137 SSVVDLPQFQDGSIHNEPVLGYRAGSRERQ-DLIEELK-RTASVIEDVPIVIAGKNITEG 310
SS + PQ Q + E Y +G RQ + +E L+ TAS ++PI GKN T
Sbjct: 4 SSSIGPPQQQSAKLFPEHF--YPSGLSPRQSEALERLRPNTASRERNIPIQFTGKNPTTN 61
Query: 311 E--PRYQVMPH 337
Y+ +PH
Sbjct: 62 SALEEYKPVPH 72
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 137 SSVVDLPQFQDGSIHNEPVLGYRAGSRERQ-DLIEELK-RTASVIEDVPIVIAGKNITEG 310
SS + PQ Q + E Y +G RQ + +E L+ TAS ++PI GKN T
Sbjct: 25 SSSIGPPQQQSAKLFPEHF--YPSGLSPRQSEALERLRPNTASRERNIPIQFTGKNPTTN 82
Query: 311 E--PRYQVMPH 337
Y+ +PH
Sbjct: 83 SALEEYKPVPH 93
>Z82282-8|CAB05278.1| 575|Caenorhabditis elegans Hypothetical
protein T07G12.11 protein.
Length = 575
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 224 QDLIEELKRTASVIEDVPIVIAGKNITEGEPRY 322
QDL+EE+ +T + ++ PI+++ G PR+
Sbjct: 135 QDLLEEMVQTVADVDQAPILLSTTLANIGVPRF 167
>Z82282-7|CAB05280.2| 584|Caenorhabditis elegans Hypothetical
protein T07G12.10 protein.
Length = 584
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 224 QDLIEELKRTASVIEDVPIVIAGKNITEGEPRY 322
QDL+EE+ +T + ++ PI+++ G PR+
Sbjct: 136 QDLLEEMVQTVADVDQAPILLSTTLANIGVPRF 168
>Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical
protein W07A8.3 protein.
Length = 784
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 326 VMPHDHSKKI-AKYYYASEKTIEKAIQASVDA-QTRWDRTPLTERVKIWQTAAELMAGAY 499
+ +D + +I A + + +TI + + D+ R+DR P+T + + QT A
Sbjct: 163 IFGNDENVQITAAFCLIASRTISRVSEFMSDSLPNRFDRLPVTYHLFLEQTKHVCKYHAR 222
Query: 500 RQSLNAATILGQ 535
RQ L + IL Q
Sbjct: 223 RQQLQSGAILNQ 234
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 338 DHSKKIAKYYYASEKTIEKAIQASVDAQTRWDRTPLTERVK 460
+++K + YY ++ I K++ A+++A D LTER K
Sbjct: 150 EYNKTQQRGYYEEQEEIRKSLSAAINADDGADDDLLTERKK 190
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +2
Query: 218 ERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMP 334
ERQ +++ + +A+V++D+PI + + + + R Q P
Sbjct: 51 ERQPAVQQRRTSANVLQDLPIFQRAQQLHQQQQRPQSFP 89
>AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein.
Length = 784
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 326 VMPHDHSKKI-AKYYYASEKTIEKAIQASVDA-QTRWDRTPLTERVKIWQTAAELMAGAY 499
+ +D + +I A + + +TI + + D+ R+DR P+T + + QT A
Sbjct: 163 IFGNDENVQITAAFCLIASRTISRVSEFMSDSLPNRFDRLPVTYHLFLEQTKHVCKYHAR 222
Query: 500 RQSLNAATILGQ 535
RQ L + IL Q
Sbjct: 223 RQQLQSGAILNQ 234
>U88314-5|AAF99882.1| 146|Caenorhabditis elegans Hypothetical
protein C46H11.3 protein.
Length = 146
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 458 LRVQSAECGPNEFEHRQTLES 396
++ +SA+CGPN E RQ LES
Sbjct: 22 IQEESADCGPNVQEVRQFLES 42
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 77 SVMLTIWARIGRV---RSLERTLSSVVDLPQFQDGSIHNEPVLGYRAGSRERQDLIEELK 247
+V + +W + R+ +ERTLS VVD I + + + AGS Q++
Sbjct: 275 AVYVELWTDVQRIDLWEDIERTLSGVVDYASGHIYHIQKDASILFTAGSFANQEVSNAAI 334
Query: 248 RTASVIEDVPIV 283
R+ IV
Sbjct: 335 RSICTARSAVIV 346
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 77 SVMLTIWARIGRV---RSLERTLSSVVDLPQFQDGSIHNEPVLGYRAGSRERQDLIEELK 247
+V + +W + R+ +ERTLS VVD I + + + AGS Q++
Sbjct: 275 AVYVELWTDVQRIDLWEDIERTLSGVVDYASGHIYHIQKDASILFTAGSFANQEVSNAAI 334
Query: 248 RTASVIEDVPIV 283
R+ IV
Sbjct: 335 RSICTARSAVIV 346
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 215 RERQDLIEELKRTASVIEDVPIVIAGKNITEG-EPRYQVMPHDHSKKI 355
++ DL E L + SVI D+P N+ +G E +P + S KI
Sbjct: 2404 KQESDLAEALLQELSVIYDMPTSTIDLNMLQGIEDNLNSLPAEESDKI 2451
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 215 RERQDLIEELKRTASVIEDVPIVIAGKNITEG-EPRYQVMPHDHSKKI 355
++ DL E L + SVI D+P N+ +G E +P + S KI
Sbjct: 2462 KQESDLAEALLQELSVIYDMPTSTIDLNMLQGIEDNLNSLPAEESDKI 2509
>U80453-7|AAN63451.1| 286|Caenorhabditis elegans Hypothetical
protein C23H3.2b protein.
Length = 286
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = -2
Query: 415 IDRRLNRLFNCFFTGIVIFSYLF*VIMGHHLISWLA 308
ID+ + ++N FF +++ +LF +++ H+ W+A
Sbjct: 91 IDKTNSTVWNLFFWNLILSIFLFPIVLAIHM-GWIA 125
>U80453-6|AAK31447.1| 349|Caenorhabditis elegans Hypothetical
protein C23H3.2a protein.
Length = 349
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = -2
Query: 415 IDRRLNRLFNCFFTGIVIFSYLF*VIMGHHLISWLA 308
ID+ + ++N FF +++ +LF +++ H+ W+A
Sbjct: 154 IDKTNSTVWNLFFWNLILSIFLFPIVLAIHM-GWIA 188
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 323 QVMPHDHSKKIAKYYYASEKTIE--KAIQASVDAQTRWDRTPLTERVK 460
+++PH +++ YYY +KT E K QA+ + P E+VK
Sbjct: 359 ELLPHHSREQLVSYYYLWKKTPEATKPKQAARRVNPTSIKRPTKEKVK 406
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 323 QVMPHDHSKKIAKYYYASEKTIE--KAIQASVDAQTRWDRTPLTERVK 460
+++PH +++ YYY +KT E K QA+ + P E+VK
Sbjct: 362 ELLPHHSREQLVSYYYLWKKTPEATKPKQAARRVNPTSIKRPTKEKVK 409
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 323 QVMPHDHSKKIAKYYYASEKTIE--KAIQASVDAQTRWDRTPLTERVK 460
+++PH +++ YYY +KT E K QA+ + P E+VK
Sbjct: 362 ELLPHHSREQLVSYYYLWKKTPEATKPKQAARRVNPTSIKRPTKEKVK 409
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,951,633
Number of Sequences: 27780
Number of extensions: 249460
Number of successful extensions: 696
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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