Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j07f
         (614 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   3.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   3.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   3.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   5.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.2  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 301 NIFSGNYNWYVFNY*SGS 248
           NIF   Y W  F+Y  GS
Sbjct: 30  NIFQVKYQWKYFDYNFGS 47


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/50 (24%), Positives = 19/50 (38%)
 Frame = +2

Query: 461 IWQTAAELMAGAYRQSLNAATILGQSKSVIQAEIDAAAELIDFFRFNVHF 610
           +W      M+G     +  A I+  + +VI A +        F   N HF
Sbjct: 162 VWIYGGGFMSGTATLDVYNADIMAATSNVIIASMQYRVGAFGFLYLNKHF 211



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 152 LPQFQDGSIHNEPVL 196
           +P  Q G++HN+P++
Sbjct: 25  VPSSQRGNVHNDPLV 39


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/50 (24%), Positives = 19/50 (38%)
 Frame = +2

Query: 461 IWQTAAELMAGAYRQSLNAATILGQSKSVIQAEIDAAAELIDFFRFNVHF 610
           +W      M+G     +  A I+  + +VI A +        F   N HF
Sbjct: 162 VWIYGGGFMSGTATLDVYNADIMAATSNVIIASMQYRVGAFGFLYLNKHF 211



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 152 LPQFQDGSIHNEPVL 196
           +P  Q G++HN+P++
Sbjct: 25  VPSSQRGNVHNDPLV 39


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 339 ITQKR*LNITMPVKKQLKRRFKRLSMLKLV 428
           I+  R L +T P+    +RR KRL+ L +V
Sbjct: 132 ISIDRYLAVTQPLIYSRRRRSKRLAGLMIV 161


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 376 TGIVIFSYLF*VIMGHHLISWLAF 305
           TG  +F+YL  +    H++ W+ F
Sbjct: 43  TGRYMFTYLHLLYQDVHVMIWIGF 66


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/55 (23%), Positives = 27/55 (49%)
 Frame = +2

Query: 287  AGKNITEGEPRYQVMPHDHSKKIAKYYYASEKTIEKAIQASVDAQTRWDRTPLTE 451
            AG + + G  +   +P D S+ I     A+   ++  I++S++     D+  +TE
Sbjct: 1251 AGTSNSRGAAQMSKVPRDVSEGIYDGSGANGSFLDNLIRSSLETGIPRDQRAMTE 1305


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,041
Number of Sequences: 438
Number of extensions: 2819
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)