Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j04f
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    25   2.0  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    25   2.7  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    25   2.7  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   3.5  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   8.2  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   8.2  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   8.2  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 32  WYLQILRNFDIHFFSVIDIFVTNFNLHVLYFLLRSKNI 145
           W+L+++   ++H   +  IF   FN+     L+RS N+
Sbjct: 520 WFLEVIALENVHSCVMPVIFAICFNILNWCMLVRSSNV 557


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 245 LCYCESFKRCTSHQ*CNGR 301
           +CYC   K C  H+ C GR
Sbjct: 294 VCYCNKVKTCPLHK-CYGR 311


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 245 LCYCESFKRCTSHQ*CNGR 301
           +CYC   K C  H+ C GR
Sbjct: 294 VCYCNKVKTCPLHK-CYGR 311


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 248 CYCESFKRCTS 280
           CYC SF RC S
Sbjct: 815 CYCVSFSRCRS 825


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 50  RNFDIHFFSVIDIFVTNFN 106
           +NFD +F S +D+  T FN
Sbjct: 363 KNFDDNFTSKVDLPYTTFN 381


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 50  RNFDIHFFSVIDIFVTNFN 106
           +NFD +F S +D+  T FN
Sbjct: 371 KNFDDNFTSKVDLPYTTFN 389


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 80   IDIFVTNFNLHVLYFLLRSKN 142
            +DI VT+FN H   F++ S N
Sbjct: 1264 VDICVTDFNDHAPVFVVPSGN 1284


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,340
Number of Sequences: 2352
Number of extensions: 10631
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)