Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j03r
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    27   0.77 
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    27   0.77 
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    23   7.2  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 19/86 (22%), Positives = 31/86 (36%)
 Frame = -2

Query: 405 CLENTL*YTCKYIITISLKSDFSESLPICFPNLIQIVARRCNFNV*KSNKNYVVTSNYTE 226
           C E      C Y  T+   +    +  +C PN    V   C   +    +  ++T N   
Sbjct: 155 CREGEPPRICYYHFTVEYYTVLGAACQVCTPNATNTVWSHCQCVLADGVERGILTVNRMI 214

Query: 225 SRNDTIYAENERKVMRFKIHAHGILL 148
                   EN+R V+  + H  G+ L
Sbjct: 215 PGPSIQVCENDRVVIDVENHMEGMEL 240


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 19/86 (22%), Positives = 31/86 (36%)
 Frame = -2

Query: 405 CLENTL*YTCKYIITISLKSDFSESLPICFPNLIQIVARRCNFNV*KSNKNYVVTSNYTE 226
           C E      C Y  T+   +    +  +C PN    V   C   +    +  ++T N   
Sbjct: 155 CREGEPPRICYYHFTVEYYTVLGAACQVCTPNATNTVWSHCQCVLADGVERGILTVNRMI 214

Query: 225 SRNDTIYAENERKVMRFKIHAHGILL 148
                   EN+R V+  + H  G+ L
Sbjct: 215 PGPSIQVCENDRVVIDVENHMEGMEL 240


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 641 YRHITSSFNVKTQKS*KCYLSASSTHVFNCMNIKHCLG 528
           Y H  +  + K + S KC+  A   H   C   + CLG
Sbjct: 220 YGHTAARCHGKDRSS-KCHRCAEDKHEGPCTRERKCLG 256


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,328
Number of Sequences: 2352
Number of extensions: 13348
Number of successful extensions: 66
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)