Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j03f
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   1.6  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   4.8  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    24   4.8  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 409 SQTPPAELRSHLSAQVPSMNRRPRHP 332
           S T   +L S +S  VPS + RPR P
Sbjct: 901 SDTDAPDLLSSISLYVPSRSLRPRDP 926


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = -2

Query: 448 AGVGWVSAPACSGSQTPPAELRSHLSAQVPSMNRRPRHPKQNQ 320
           AG GW S   C+G+     E     S  +PS      H +  Q
Sbjct: 414 AGGGWRSERTCNGNNDTVQETLIPSSQVLPSSRSSQPHQQPQQ 456


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 177 FIFCKPLNNFVTGTSLNTKIK 115
           +IFCK +N F T ++ NT  K
Sbjct: 365 YIFCKAINIFGTRSTRNTVSK 385


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,029
Number of Sequences: 2352
Number of extensions: 12120
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)