Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11j03f
         (647 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated prote...    32   2.0  
AF227948-1|AAF61709.2| 1189|Homo sapiens HBV pX associated prote...    32   2.0  
AB011156-1|BAA25510.1|  738|Homo sapiens KIAA0584 protein protein.     32   2.0  
L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated pr...    30   8.2  
BC045799-1|AAH45799.1|  188|Homo sapiens zinc finger protein 428...    30   8.2  

>AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated protein 8
            large isoform protein.
          Length = 1431

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 19/68 (27%), Positives = 32/68 (47%)
 Frame = +1

Query: 259  FSTNGDAVQSTVKDRMLERDAGFVSGGEDDDSCSGPAHSDDSGVRLVESETRNKRERTPS 438
            F    +A+   ++D + E D G V  G+D  + +G    D S + L E    NKR +  +
Sbjct: 1013 FDEFDEAIDEAIEDDIKEADGGGVGRGKDISTITGHRGKDISTI-LDEERKENKRPQRAA 1071

Query: 439  RLQPPKKR 462
              +  K+R
Sbjct: 1072 AARRKKRR 1079


>AF227948-1|AAF61709.2| 1189|Homo sapiens HBV pX associated
           protein-8 protein.
          Length = 1189

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 19/68 (27%), Positives = 32/68 (47%)
 Frame = +1

Query: 259 FSTNGDAVQSTVKDRMLERDAGFVSGGEDDDSCSGPAHSDDSGVRLVESETRNKRERTPS 438
           F    +A+   ++D + E D G V  G+D  + +G    D S + L E    NKR +  +
Sbjct: 771 FDEFDEAIDEAIEDDIKEADGGGVGRGKDISTITGHRGKDISTI-LDEERKENKRPQRAA 829

Query: 439 RLQPPKKR 462
             +  K+R
Sbjct: 830 AARRKKRR 837


>AB011156-1|BAA25510.1|  738|Homo sapiens KIAA0584 protein protein.
          Length = 738

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 27/74 (36%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
 Frame = -2

Query: 517 GSASHCRGWPRHHWN*GVFVSLEAGVGW-------VSAPACSGSQTPPAELRSHLSAQVP 359
           GSAS CR     HW  G+  +  AG  W       V  PA  G   PPA  RS L   +P
Sbjct: 32  GSASGCRYAAHPHW--GLGGAAAAGGSWEPQPPRPVCEPAGRGKPHPPAAPRSPL---LP 86

Query: 358 SMNRRPRHPKQNQR 317
              RRP   +   R
Sbjct: 87  GSRRRPHAAQPGAR 100


>L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated
           protein 1B protein.
          Length = 2468

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 361 GPAHSDDSGVRLVESETRNKRERTPSRLQPPKKR 462
           GPA S D G+   E E   + E+TP  L+P +K+
Sbjct: 887 GPAESPDEGITTTEGE--GECEQTPEELEPVEKQ 918


>BC045799-1|AAH45799.1|  188|Homo sapiens zinc finger protein 428
           protein.
          Length = 188

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +1

Query: 322 GFVSGGEDDDSCS-GPAHSDDSGVRLVESETRNKRE 426
           G+ S  EDDD  S GP HS DS   L E ++  + +
Sbjct: 12  GYASLEEDDDDLSPGPEHSSDSEYTLSEPDSEEEED 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,298,945
Number of Sequences: 237096
Number of extensions: 1900594
Number of successful extensions: 5121
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5121
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)