Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11j03f
(647 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022198-1|AAY51592.1| 513|Drosophila melanogaster IP01125p pro... 31 1.8
BT015992-1|AAV36877.1| 513|Drosophila melanogaster RE53769p pro... 31 1.8
AY089592-1|AAL90330.1| 480|Drosophila melanogaster RE18506p pro... 31 1.8
AF220236-1|AAF33780.1| 513|Drosophila melanogaster GTX/Nkx6B-li... 31 1.8
AE014296-2395|AAF49729.3| 513|Drosophila melanogaster CG13475-P... 31 1.8
BT023811-1|AAZ66318.1| 971|Drosophila melanogaster LP23835p pro... 30 2.4
AE014296-3083|AAF49209.2| 289|Drosophila melanogaster CG14077-P... 30 2.4
AE013599-3891|AAF47220.2| 947|Drosophila melanogaster CG30169-P... 30 2.4
AF132148-1|AAD34736.1| 653|Drosophila melanogaster unknown prot... 30 3.1
AE014297-3634|AAF56342.1| 653|Drosophila melanogaster CG5808-PA... 30 3.1
AF010326-1|AAB62575.1| 182|Drosophila melanogaster short form o... 29 7.2
>BT022198-1|AAY51592.1| 513|Drosophila melanogaster IP01125p
protein.
Length = 513
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 334 GGEDDDSCSGPAHSDDSGVRLVESETRNKRERTPS 438
GG++D CS SD+ + + ES +NKR R+ S
Sbjct: 466 GGDNDGDCSETMDSDNESLDMGESPAQNKRCRSNS 500
>BT015992-1|AAV36877.1| 513|Drosophila melanogaster RE53769p
protein.
Length = 513
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 334 GGEDDDSCSGPAHSDDSGVRLVESETRNKRERTPS 438
GG++D CS SD+ + + ES +NKR R+ S
Sbjct: 466 GGDNDGDCSETMDSDNESLDMGESPAQNKRCRSNS 500
>AY089592-1|AAL90330.1| 480|Drosophila melanogaster RE18506p
protein.
Length = 480
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 334 GGEDDDSCSGPAHSDDSGVRLVESETRNKRERTPS 438
GG++D CS SD+ + + ES +NKR R+ S
Sbjct: 433 GGDNDGDCSETMDSDNESLDMGESPAQNKRCRSNS 467
>AF220236-1|AAF33780.1| 513|Drosophila melanogaster GTX/Nkx6B-like
homeodomain protein protein.
Length = 513
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 334 GGEDDDSCSGPAHSDDSGVRLVESETRNKRERTPS 438
GG++D CS SD+ + + ES +NKR R+ S
Sbjct: 466 GGDNDGDCSETMDSDNESLDMGESPAQNKRCRSNS 500
>AE014296-2395|AAF49729.3| 513|Drosophila melanogaster CG13475-PA
protein.
Length = 513
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 334 GGEDDDSCSGPAHSDDSGVRLVESETRNKRERTPS 438
GG++D CS SD+ + + ES +NKR R+ S
Sbjct: 466 GGDNDGDCSETMDSDNESLDMGESPAQNKRCRSNS 500
>BT023811-1|AAZ66318.1| 971|Drosophila melanogaster LP23835p
protein.
Length = 971
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +1
Query: 349 DSCSGPAHSDDSGVRLVESET----RNKRERTPSRLQPPK 456
D CS P +++D ESE RNKR RT SR + PK
Sbjct: 97 DFCSSPTYAEDEDEPSHESEPWFRFRNKRIRTYSRKRDPK 136
>AE014296-3083|AAF49209.2| 289|Drosophila melanogaster CG14077-PA
protein.
Length = 289
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 277 AVQSTVKDRMLERDAGFVSG-GEDDDSCSGPAHSDDSGVRLVESETRNKRERTPSRLQPP 453
A+ + + R++ + G SG G D C G + S +E + K + PP
Sbjct: 15 AINTVITQRLMSKSDGKSSGTGSKDAKCKGTKDAKSSNAAKKSTEAKAKASDAAKKATPP 74
Query: 454 K 456
K
Sbjct: 75 K 75
>AE013599-3891|AAF47220.2| 947|Drosophila melanogaster CG30169-PA
protein.
Length = 947
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +1
Query: 349 DSCSGPAHSDDSGVRLVESET----RNKRERTPSRLQPPK 456
D CS P +++D ESE RNKR RT SR + PK
Sbjct: 97 DFCSSPTYAEDEDEPSHESEPWFRFRNKRIRTYSRKRDPK 136
>AF132148-1|AAD34736.1| 653|Drosophila melanogaster unknown
protein.
Length = 653
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +1
Query: 241 SLKMSNFSTNGDAVQSTVKDRMLERDAGFVSGGEDDDSCSGPAHSDDSGVRLVESETRNK 420
S K + S + S + E ++ S +DS S + SDD R ++++ K
Sbjct: 577 SKKQAKKSKRAASSSSDSSESSSESESDSTSSDSSEDSSSSSSSSDDRSKRKKSTKSKQK 636
Query: 421 RERTPSRLQPPKKRIR 468
+ ++ S + KK R
Sbjct: 637 KSKSKSSHKSKKKHNR 652
>AE014297-3634|AAF56342.1| 653|Drosophila melanogaster CG5808-PA
protein.
Length = 653
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +1
Query: 241 SLKMSNFSTNGDAVQSTVKDRMLERDAGFVSGGEDDDSCSGPAHSDDSGVRLVESETRNK 420
S K + S + S + E ++ S +DS S + SDD R ++++ K
Sbjct: 577 SKKQAKKSKRAASSSSDSSESSSESESDSTSSDSSEDSSSSSSSSDDRSKRKKSTKSKQK 636
Query: 421 RERTPSRLQPPKKRIR 468
+ ++ S + KK R
Sbjct: 637 KSKSKSSHKSKKKHNR 652
>AF010326-1|AAB62575.1| 182|Drosophila melanogaster short form of
CHIP protein.
Length = 182
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 424 PACSGSQTPPAELRSHLSAQVPSMNRRPRHP 332
PA S S+TP + R+HLS + R RHP
Sbjct: 67 PAASCSRTPTSLARTHLSIPPHLLPRAHRHP 97
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,543,025
Number of Sequences: 53049
Number of extensions: 587610
Number of successful extensions: 1994
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1993
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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