Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11j01f
(522 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25B8.01 |dap1|SPAC26H5.15|cytochrome P450 regulator Dap1|Sch... 100 2e-22
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 29 0.56
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.2
SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyce... 26 3.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.9
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 26 3.9
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 25 5.2
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 25 6.8
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.8
SPBC1718.05 |trs31||TRAPP complex subunit Trs31 |Schizosaccharom... 25 6.8
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 25 6.8
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 6.8
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 25 9.0
SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit... 25 9.0
SPCC622.16c |epe1||Jmjc domain chromatin associated protein Epe1... 25 9.0
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 25 9.0
SPCC663.12 |cid12||poly|Schizosaccharomyces pombe|chr 3|||Manual 25 9.0
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 25 9.0
>SPAC25B8.01 |dap1|SPAC26H5.15|cytochrome P450 regulator
Dap1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 166
Score = 100 bits (239), Expect = 2e-22
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 5/106 (4%)
Frame = +1
Query: 208 KDLTVAELKKYDGTQPDGRVLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQ 387
+D T AELK+Y+G++ + V LA+ G +++VT G +FYGP GPYSAFAG DA+RGLA
Sbjct: 41 RDYTPAELKEYNGSK-NSLVFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNS 99
Query: 388 -----VAASENDEYDDVSDLGSDEIASAKEWEEQFREKYDIVGRLL 510
+ S+ +E DD SDL +E + +W+ F +KY VGRL+
Sbjct: 100 FDDEFIPDSDAEELDDCSDLNDEERQALNDWKAFFDQKYQAVGRLI 145
>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 479
Score = 28.7 bits (61), Expect = 0.56
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 250 QPDGRVLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATG 384
Q R L+ +NG++ D+T + G G SAF GKDAT G
Sbjct: 369 QSKTRPLVLINGVVHDMTGFEHPGGQGLLRSAF-GKDATAAFNGG 412
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 370 GLATGQVAASENDEYDDVSDLGSDEIASAKEWEEQFREKYD 492
G + G+++ E DEYDD SDE+ S E E D
Sbjct: 354 GKSQGEISEQEEDEYDDAE---SDEMHSPYSTHEPESEPED 391
>SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 481
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 464 HSLAEAISSEPRSLTSSYSSFSDAATC-PVAKPLVASLPANAEYXXXXXXXXXXLVTSNI 288
H L EA + +S + S+ + P+ KP+ A++PA + Y + ++
Sbjct: 88 HKLTEAREGKLKSHATGLSTQKTSTLARPIQKPIEATIPAPSPYLFSEPLPSISSLDLDV 147
Query: 287 IPFTAK 270
+ TA+
Sbjct: 148 LRLTAR 153
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 3.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 449 AISSEPRSLTSSYSSFSDAATCPVAKPLVASLPANAEY 336
A SE S +S SS+SD AT + P ++EY
Sbjct: 91 ATPSETNSYSSPVSSYSDPATSQLPSSTSFFSPTSSEY 128
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 518 PNLRRRPTMSYFSLNCSSHSLAEAISSEPRSLTSS 414
PN+R T+S + CS S +++I++EP S+ +S
Sbjct: 595 PNVRIFDTVSNRNWICSIPSHSDSIAAEPNSVPTS 629
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 25.4 bits (53), Expect = 5.2
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 283 GIIFDVTRGKRFYGPGGPYSAFAGKDATR-GLATGQVAASENDEYDDV-SDLGSDEIASA 456
GII D+ + K+F G G ++ AG T LA Q + V S++ S EI
Sbjct: 51 GIITDLIKSKKFGGKGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEVYSSEIKKT 110
Query: 457 KEWEEQFR 480
+ E FR
Sbjct: 111 EALMENFR 118
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 455 AEAISSEPRSLTSSYSSFSDAATCPVAKPLVAS 357
AE + RSL SY+ FS + P ++ L+A+
Sbjct: 4 AEQVHQSLRSLVLSYAHFSPSILIPASQYLLAA 36
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 385 QVAASENDEYDDVSDLGSDEIASAKEWEEQ 474
Q +SE+D +SD DE SA E +E+
Sbjct: 218 QSCSSESDRVSQISDDEEDEEGSADEEDEE 247
>SPBC1718.05 |trs31||TRAPP complex subunit Trs31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 209
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +1
Query: 28 QHVYKMADETNSLTVWDELTSPLNLVLIGVIVYLIYKIIKSNFESEAN 171
+H Y++ + L VW E ++G++ Y+ + K F A+
Sbjct: 73 EHGYRVGQKLVELVVWRERNPKRETRILGILQYIHSSVWKYLFGKHAD 120
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 345 RRVWASRSIKSLASSNIKYNSIHSQKNSS 259
R+ WA+ + K+LAS + N ++KN S
Sbjct: 769 RKTWANLNSKTLASFELLNNLTEARKNFS 797
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -2
Query: 503 RPTMSYFSLNCSSHSLAEAISSEPRSLTSSYSSFSDAATCPVAKPLVASLPANAEY 336
+PT + + N S S + SS T+SYSS + + L +S+ + Y
Sbjct: 887 KPTFKFSTSNSGSTSYSIPSSSSRNEGTTSYSSNITVTSSTLKPSLTSSVSTASSY 942
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 424 SDLGSDEIAS-AKEWEEQFREKYDIVGRLLKLGE 522
+ L S E+ + +++W+E+ + + G+ +LGE
Sbjct: 331 ASLSSSELINISRDWDERLHYELQVSGKSFRLGE 364
>SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit
Rrn7 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 24.6 bits (51), Expect = 9.0
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -2
Query: 167 ASDSKFDLMXXXXXXXXXXXXXXXRGLVNSSHTV---RLLVSSAILYTCCVRERVACT 3
+SDS FDL+ + + SH++ RLL SSA +Y C+ R+ T
Sbjct: 143 SSDSDFDLIDPESQPGADPSSRKTKE-TSQSHSISYPRLLYSSAFIYVACLLLRLPLT 199
>SPCC622.16c |epe1||Jmjc domain chromatin associated protein
Epe1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 948
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 503 RPTMSYFSLNCSSHSLAEAISSEPRSLTSSYSSFSD 396
R + + S NC SH + I S P+ +SY S+
Sbjct: 532 RRSAKHPSCNCFSHLQTKLIDSGPKPANNSYQHQSN 567
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 24.6 bits (51), Expect = 9.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 346 FAGKDATRGLATGQVAASENDEYDDVSDLGSDEIASAKEWE 468
FAG++ A G+ +E DE DD ++ +DEI +WE
Sbjct: 674 FAGEEVEED-AFGE---TEMDE-DDFEEIDTDEIEEQSDWE 709
>SPCC663.12 |cid12||poly|Schizosaccharomyces pombe|chr 3|||Manual
Length = 336
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 433 GSDEIASAKEWEEQFREKYDIVGRLLKL 516
G+D+ E ++ + E++ I GRLL L
Sbjct: 133 GNDKACRTAELQKAYNEEHPIFGRLLML 160
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 494 MSYFSLNCSSHSLAEAISSEPRSLTSS 414
+ + NC +SLA+ I R +TSS
Sbjct: 76 LRWLGFNCRFYSLAKYIDERTREMTSS 102
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.134 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,880,788
Number of Sequences: 5004
Number of extensions: 32854
Number of successful extensions: 114
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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