Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11i17f
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    23   1.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.7  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   5.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   5.1  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.9  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 62  LLFNNKRPCVTAEMDKQAAVHLLKMEDRTKNANGDIEDEGA 184
           + FN+K   V+ E ++ + ++L+  E  T  A+  IE +GA
Sbjct: 129 IYFNHKLMSVSFEDERISVMNLITEEITTHQADLIIEADGA 169


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 62  LLFNNKRPCVTAEMDKQAAVHLLKMEDRTKNANGDIEDEGA 184
           + FN+K   V+ E ++ + ++L+  E  T  A+  IE +GA
Sbjct: 129 IYFNHKLMSVSFEDERISVMNLITEEITTHQADLIIEADGA 169


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 62  LLFNNKRPCVTAEMDKQAAVHLLKMEDRTKNANGDIEDEGA 184
           + FN+K   V+ E ++ + ++L+  E  T  A+  IE +GA
Sbjct: 129 IYFNHKLMSVSFEDERISVMNLITEEITTHQADLIIEADGA 169


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 520 NPLPIEQGGGAGVADHVWSSSGVLET 443
           NP  ++  GG       W+S+G+  T
Sbjct: 38  NPYALKDAGGTAADMSAWTSAGLQPT 63


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +1

Query: 28  PY-CPGPVYKIYFTIQ*QETV 87
           PY  PGP Y  + T+Q   TV
Sbjct: 296 PYSAPGPTYSTWSTVQTPTTV 316


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
 Frame = -2

Query: 190 LLGAFIFYVAVGVFRSIFHFQQVNCRLFI----HFCC 92
           LL  + FY A+ +   I++F    CR FI    HF C
Sbjct: 282 LLCIYYFYCALIILLCIYYF----CRAFIIFPTHFYC 314



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 199 IHLLLGAFIFYVAVGVFRSIFHF 131
           +H LL  + FY A  +   +++F
Sbjct: 94  VHFLLCTYYFYYAFIILLCVYYF 116


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 422 SGFDNCFRFENATRRPDVI 478
           S F++C R  N +R+P  +
Sbjct: 404 SVFESCTRLNNESRKPSFV 422


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 390 NGSPTPSRRPAPDSTTAFVSRTPLEDQ 470
           +G+PTP   PAP   +   S     DQ
Sbjct: 314 SGTPTPMMSPAPPQDSMGYSMGSAYDQ 340


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 122 HLLKMEDRTKNANGDIEDEG 181
           HL ++  R ++AN D +D+G
Sbjct: 167 HLQELGLRLEDANSDEQDDG 186


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 122 HLLKMEDRTKNANGDIEDEG 181
           HL ++  R ++AN D +D+G
Sbjct: 167 HLQELGLRLEDANSDEQDDG 186


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 3   VFVGLRFGALLSGSCV*DIFYYSITRDRVS 92
           +F+ L F  + S   + DIFYY  T   VS
Sbjct: 198 IFLVLVFVQMQSVQDLSDIFYYKDTAQLVS 227


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 122 HLLKMEDRTKNANGDIEDEG 181
           HL ++  R ++AN D +D+G
Sbjct: 167 HLQELGLRLEDANSDEQDDG 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,370
Number of Sequences: 336
Number of extensions: 3791
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)