Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11i17f
         (653 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX470253-2|CAI16294.1| 1530|Homo sapiens chromosome 1 open readi...    31   4.7  
AL834414-1|CAD39076.1|  625|Homo sapiens hypothetical protein pr...    31   4.7  
AB065605-1|BAC05833.1|  303|Homo sapiens seven transmembrane hel...    31   4.7  
AB020671-1|BAA74887.2| 1402|Homo sapiens KIAA0864 protein protein.     30   8.3  

>BX470253-2|CAI16294.1| 1530|Homo sapiens chromosome 1 open reading
            frame 173 protein.
          Length = 1530

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 98   EMDKQAAVHLLKMEDRTKNANGDIEDEGAKQK 193
            E DK+  +    M+DR    +GD+E EG  QK
Sbjct: 1297 EEDKECTLETEAMQDRNSEGDGDMEGEGNTQK 1328


>AL834414-1|CAD39076.1|  625|Homo sapiens hypothetical protein
           protein.
          Length = 625

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 98  EMDKQAAVHLLKMEDRTKNANGDIEDEGAKQK 193
           E DK+  +    M+DR    +GD+E EG  QK
Sbjct: 392 EEDKECTLETEAMQDRNSEGDGDMEGEGNTQK 423


>AB065605-1|BAC05833.1|  303|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 303

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 166 VAVGVFRSIFHFQQVNCRLFIHFCCDTRSLV 74
           V+VG+  +IFH      RL +HF CD  +L+
Sbjct: 137 VSVGLTVAIFHLPFCGSRLLLHFFCDITALL 167


>AB020671-1|BAA74887.2| 1402|Homo sapiens KIAA0864 protein protein.
          Length = 1402

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 18/67 (26%), Positives = 31/67 (46%)
 Frame = -2

Query: 301 GSPSSEDHHDGSQDHGPQLEPAELSQLFN*DGV*IHLLLGAFIFYVAVGVFRSIFHFQQV 122
           G+P  E++ DGS      + P +  ++ + +G   H    A +   A GV R    F  +
Sbjct: 248 GAPPGEEYGDGSPSREDSMVPPKSVEVLDREG---HQQGTAKLDQGAPGVKRQRIRFSTI 304

Query: 121 NCRLFIH 101
            C+ +IH
Sbjct: 305 QCQRYIH 311


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,168,672
Number of Sequences: 237096
Number of extensions: 2500410
Number of successful extensions: 7130
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7078
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)