Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11i14f
         (656 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0051 + 12863978-12864476,12864575-12864674,12865567-128656...    31   1.1  
09_03_0156 - 12844549-12845138,12845237-12845723                       31   1.1  
11_06_0734 - 26774471-26774652,26775008-26775137,26775447-267755...    30   1.9  
05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291...    28   5.7  
07_01_0880 + 7301042-7301548                                           28   7.5  
03_05_1011 + 29658144-29658310,29659531-29659676,29660526-296606...    27   9.9  

>11_04_0051 +
           12863978-12864476,12864575-12864674,12865567-12865657,
           12866114-12866176,12866364-12866549,12866994-12867024,
           12867054-12867502
          Length = 472

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 281 EKICYNYGIIKENEQFVMYANYSNSLTYPNNEDRIAYLTEDVGLNAYYYYF 433
           E+    + + + N +F+   N    LTY   E+  A LTE+  L  Y  Y+
Sbjct: 66  EEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYY 116


>09_03_0156 - 12844549-12845138,12845237-12845723
          Length = 358

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 281 EKICYNYGIIKENEQFVMYANYSNSLTYPNNEDRIAYLTEDVGLNAYYYYF 433
           E+    + + + N +F+   N    LTY   E+  A LTE+  L  Y  Y+
Sbjct: 62  EEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYY 112


>11_06_0734 -
           26774471-26774652,26775008-26775137,26775447-26775596,
           26775685-26775918,26775990-26776161,26776285-26776506,
           26776604-26776770,26776880-26777018,26777342-26777693,
           26778175-26778370
          Length = 647

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 401 DVGLNAYYYYFHSHLPFWWNSGKYGAFKERRGEIYFFFYQQLL 529
           + G+      FH  LP W  +GKYG +K  +   YF  + +L+
Sbjct: 247 EYGMKVMLTLFHHSLPPW--AGKYGGWKMEKTVTYFMDFVRLV 287


>05_04_0191 +
           18927302-18927707,18928747-18928979,18929062-18929127,
           18929262-18929340,18929935-18930014,18930099-18930122,
           18930254-18930375,18930902-18931109,18931960-18932006,
           18932914-18932998,18933292-18933355,18933488-18933609
          Length = 511

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +2

Query: 278 DEKICYNYGIIKENEQFVM 334
           DE +C+ YG ++ENE +++
Sbjct: 459 DEVLCWLYGTVRENEDYIL 477


>07_01_0880 + 7301042-7301548
          Length = 168

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 28/100 (28%), Positives = 34/100 (34%), Gaps = 5/100 (5%)
 Frame = -1

Query: 617 GGSQFEEASTRKTQGFYPIHW*DAPCSNELTVVGRRRS----RFPHDVP*KLRIYQ-SST 453
           G S F    +    G  P  W   P + + TVV    +      P   P     YQ SS 
Sbjct: 15  GASSFRVYYSLGAAGTVPFVWESKPGTPKSTVVPASAADGGYAMPPISPPPSYSYQWSSC 74

Query: 452 RTVSVSGNSNNKHLGQHLQLSKQFCLRCWGKSGNWNSWRT 333
            +      S  K   + L  S   C   W  SG W SW T
Sbjct: 75  NSDQPPPPSKAKKCRRRLSTSSSSC--SWASSGGWMSWLT 112


>03_05_1011 +
           29658144-29658310,29659531-29659676,29660526-29660602,
           29660682-29660804,29661817-29661924,29661995-29662075,
           29662157-29662309,29662469-29662540,29662745-29662863,
           29662958-29663071,29663176-29663221,29664865-29664933,
           29665662-29665808,29666410-29666706
          Length = 572

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 431 FHSHLPFWWNSGKYGAFKERRGEIYFFFYQ 520
           FH  LPF   +G  G  +E   E++++F +
Sbjct: 45  FHGRLPFHLETGYVGVDEETGTELFYYFVE 74


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,952,030
Number of Sequences: 37544
Number of extensions: 334894
Number of successful extensions: 837
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)