Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11i14f
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73969-5|CAA98231.1|  178|Caenorhabditis elegans Hypothetical pr...    26   2.9  
Z93389-1|CAB07668.1|  346|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U80023-3|AAG24039.1|  324|Caenorhabditis elegans Serpentine rece...    28   6.7  
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ...    27   8.9  
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical...    27   8.9  

>Z73969-5|CAA98231.1|  178|Caenorhabditis elegans Hypothetical
           protein C12D8.6 protein.
          Length = 178

 Score = 25.8 bits (54), Expect(2) = 2.9
 Identities = 17/60 (28%), Positives = 23/60 (38%)
 Frame = +2

Query: 206 YPQYFVNMEVKNKMDYVKMMDGCLDEKICYNYGIIKENEQFVMYANYSNSLTYPNNEDRI 385
           YP +   +  KNK D VK MD C   +   N  +    EQ        N L +     +I
Sbjct: 30  YPDFLEKVYHKNKNDVVKDMDICGINEELDNIAVADMTEQQAHRLLRENQLAWKKEGTKI 89



 Score = 21.8 bits (44), Expect(2) = 2.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 419 YYYYFHSHLPFWWNSGKYGAF 481
           YY Y  S+ P ++    YGA+
Sbjct: 130 YYGYASSYYPSYYGGYGYGAY 150


>Z93389-1|CAB07668.1|  346|Caenorhabditis elegans Hypothetical
           protein T13F3.1 protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 238 FNFHVDKILRIS-FVWSR*NEAGGVRALDNSYVVGV*EHSLVHVDSGVACCFVETFKIFG 62
           ++  +D I+ I+ FVW R NE  GV+ L+    +G+    LV + S     +  T   + 
Sbjct: 171 YDLKIDDIVYIAAFVWPR-NETTGVKYLNKRSAIGIGFDQLVVIISLTVIAYCGTCCYYK 229

Query: 61  IIEQL 47
           I +Q+
Sbjct: 230 IQQQM 234


>U80023-3|AAG24039.1|  324|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 30 protein.
          Length = 324

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -1

Query: 524 VVGRRRSRFPHDVP*KLRIYQSSTRTVSVSGNSNNKHL 411
           ++G+++   PH  P      +S+TRT S+S  +N+ HL
Sbjct: 285 IIGKKKQPKPH--PEMCGPIRSNTRTTSISVTNNSSHL 320


>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -2

Query: 253 VVHFIFNFHVDKILRISFVWSR*NEAGGVRALDNSYVVGV*EHSLV 116
           ++H + N+ ++  +RI FV     EAG ++ L  + VV V E+ ++
Sbjct: 743 IIHRLDNYSIETRVRIMFVMGVPVEAGFLKNLRKTAVVRVDENQMI 788


>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -2

Query: 253 VVHFIFNFHVDKILRISFVWSR*NEAGGVRALDNSYVVGV*EHSLV 116
           ++H + N+ ++  +RI FV     EAG ++ L  + VV V E+ ++
Sbjct: 743 IIHRLDNYSIETRVRIMFVMGVPVEAGFLKNLRKTAVVRVDENQMI 788


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,681,987
Number of Sequences: 27780
Number of extensions: 303384
Number of successful extensions: 842
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)