Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11i08f
         (582 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.6  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 324 LKSSLGSGILAMPMAFKNIGL 386
           L S LG G+  MPM     GL
Sbjct: 83  LSSGLGGGLSGMPMPALGFGL 103


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 291 KTSTIGAFFHLLKSSLGSGIL 353
           K +T    +H L S LG+G+L
Sbjct: 96  KQNTKSFIYHFLHSWLGTGLL 116


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +3

Query: 219 ITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSG 347
           I++DRK  + EN Y       ++ + S +     L+K +   G
Sbjct: 717 ISVDRKAVIAENTYLLTLDGDIDFQPSAVLLLIDLMKKNRNLG 759


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +3

Query: 219 ITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSG 347
           I++DRK  + EN Y       ++ + S +     L+K +   G
Sbjct: 717 ISVDRKAVIAENTYLLTLDGDIDFQPSAVLLLIDLMKKNRNLG 759


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +3

Query: 219 ITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSG 347
           I++DRK  + EN Y       ++ + S +     L+K +   G
Sbjct: 717 ISVDRKAVIAENTYLLTLDGDIDFQPSAVLLLIDLMKKNRNLG 759


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +3

Query: 219 ITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSG 347
           I++DRK  + EN Y       ++ + S +     L+K +   G
Sbjct: 717 ISVDRKAVIAENTYLLTLDGDIDFQPSAVLLLIDLMKKNRNLG 759


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 291 KTSTIGAFFHLLKSSLGSGIL 353
           K +T    +H L S LG+G+L
Sbjct: 96  KQNTKSFIYHFLHSWLGTGLL 116


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 300 TIGAFFHLLKSSLGS 344
           T G FFH+ KS++ S
Sbjct: 291 TAGGFFHVKKSTIFS 305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,092
Number of Sequences: 336
Number of extensions: 2842
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)