Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11i08f
(582 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0601 - 30278455-30278572,30280211-30280676,30280748-302809... 47 1e-05
06_03_0842 + 25307509-25308049,25308507-25308659,25308770-253089... 46 3e-05
06_01_1136 + 9407282-9407663,9408075-9408227,9408336-9408539,940... 45 5e-05
02_01_0681 - 5059082-5059217,5059318-5059783,5059869-5060072,506... 45 5e-05
04_04_0819 - 28312667-28313219,28315157-28316430 43 2e-04
02_05_0264 + 27263562-27264830 41 8e-04
07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907 38 0.008
01_06_1194 - 35313132-35313154,35314462-35314604,35314751-353154... 37 0.010
06_03_0915 - 25929433-25930893 37 0.013
01_06_1541 - 38127014-38128022,38128116-38128209,38128302-381285... 36 0.031
02_01_0018 + 119890-120238,120331-120424,120518-121529 34 0.072
07_01_0248 - 1821340-1821996,1823619-1823761,1824239-1824453,182... 34 0.095
01_06_1540 - 38111557-38111985,38112087-38112311,38112494-381128... 34 0.095
04_04_0140 - 23073032-23073130,23073270-23073338,23073448-230735... 33 0.13
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 33 0.13
12_01_0853 + 7996492-7996667,7996751-7997655,7998533-7998624,799... 31 0.89
12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551 30 1.2
12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660 30 1.2
11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360 30 1.5
08_01_0185 + 1558580-1558755,1558848-1559737,1559828-1559919,156... 30 1.5
06_03_0442 + 20837492-20837621,20841842-20842075,20842435-208425... 29 2.0
04_04_0795 - 28111155-28111649,28111747-28112405,28112499-281126... 29 2.0
01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708 29 2.0
06_01_0873 - 6693397-6694038,6694231-6694370,6694713-6694930,669... 29 2.7
02_05_0975 + 33227431-33227730,33228556-33228636,33228883-332296... 29 2.7
12_01_0599 - 4892146-4893552 28 4.7
07_03_1583 - 27898375-27898436,27898455-27898539,27898621-278987... 28 4.7
04_04_1451 + 33695734-33695806,33695946-33696179,33696341-336964... 28 4.7
01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833... 28 4.7
10_06_0188 - 11603941-11604528 27 8.2
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 27 8.2
04_04_0338 + 24509698-24510042,24510373-24510490,24510539-245106... 27 8.2
>02_05_0601 -
30278455-30278572,30280211-30280676,30280748-30280951,
30281065-30281220,30281336-30281738
Length = 448
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +3
Query: 195 MPSKTQ-STITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSGILAMPMAF 371
MP T+ S L RK +D H + S GA F+L + +G+GI+A+P
Sbjct: 3 MPMPTEGSEPLLPRKQRDGGDDGAASSHDHFDG-ASFSGAVFNLSTTIVGAGIMALPATM 61
Query: 372 KNIGLIPGSIGTVVVAVIATHCVHILVSTSRDV 470
K +GL+PG I ++ AV+ + +LV SR V
Sbjct: 62 KVLGLVPGLILVMLAAVLTDASIELLVRFSRAV 94
>06_03_0842 +
25307509-25308049,25308507-25308659,25308770-25308973,
25309056-25309521,25309614-25309746
Length = 498
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/97 (29%), Positives = 52/97 (53%)
Frame = +3
Query: 171 SVSGSNEDMPSKTQSTITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSGI 350
S +GS + + +T+ T V E ++ F + S GA F+L + +G+GI
Sbjct: 47 SPNGSQQIVQKETRDETTPLLPVKVEEEGFHEF------NGASFSGAVFNLSTTIVGAGI 100
Query: 351 LAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTS 461
+A+P + K +G+IPG + +VVA++ + +LV S
Sbjct: 101 MALPASIKMLGIIPGILMIIVVALLTEASIDMLVRCS 137
>06_01_1136 +
9407282-9407663,9408075-9408227,9408336-9408539,
9408709-9409174,9409434-9409575
Length = 448
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = +3
Query: 306 GAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSR 464
GA F+L + +G+GI+A+P K +GL PG + ++ A++ + +LV +SR
Sbjct: 33 GAVFNLSTTIVGAGIMALPATMKVLGLAPGLVAILLAALLTDASIELLVRSSR 85
>02_01_0681 -
5059082-5059217,5059318-5059783,5059869-5060072,
5060163-5060315,5060849-5061269
Length = 459
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/54 (35%), Positives = 36/54 (66%)
Frame = +3
Query: 306 GAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRD 467
GA F+L + +G+GI+A+P + K +G+IPG + ++VA++ + +LV S +
Sbjct: 46 GAVFNLSTTIVGAGIMALPASIKMLGIIPGILMIILVALLTEASIDMLVRCSHE 99
>04_04_0819 - 28312667-28313219,28315157-28316430
Length = 608
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 288 HKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSR 464
H +S F ++ + +GSG+L +P F G + GS+ + VA + HC+ +LV+ R
Sbjct: 33 HLSSQPKTFANVFIAVVGSGVLGLPYTFSRTGWVAGSVLLLAVAALTFHCMMLLVACRR 91
>02_05_0264 + 27263562-27264830
Length = 422
Score = 40.7 bits (91), Expect = 8e-04
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +3
Query: 312 FFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTP 491
F ++ + +G+G+L +P F G GSI + VA + +C+ +LV+ R + A + P
Sbjct: 39 FANVFIAVVGAGVLGLPYTFSRTGWAAGSILLLSVAALTFYCMMLLVACRRRL--ADEHP 96
Query: 492 SL-SYTDTCETVFKIGPRKL 548
+ S+ D + VF+ GP +L
Sbjct: 97 KIASFGDLGDAVFR-GPGRL 115
>07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907
Length = 424
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3
Query: 318 HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILV 452
+++ S +G+G+L +P AF+ G + GS+G +C+ +LV
Sbjct: 36 NVVVSIVGTGVLGLPYAFRTAGWVAGSLGVAAAGCATLYCMLLLV 80
>01_06_1194 -
35313132-35313154,35314462-35314604,35314751-35315444,
35315746-35315895,35316011-35316419
Length = 472
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +3
Query: 297 STIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSR 464
S +GA F++ S +G+GI+++P A + +G+ P V VA++A V ++ +R
Sbjct: 41 SVLGAVFNVSTSVVGAGIMSIPAAMRVLGVAPTVALVVGVALLANAAVDFMLRYTR 96
>06_03_0915 - 25929433-25930893
Length = 486
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +3
Query: 309 AFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILV 452
A F+L S +G+GI+A+P K +G+ G + +V+ +++ + +LV
Sbjct: 79 AVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLV 126
>01_06_1541 -
38127014-38128022,38128116-38128209,38128302-38128535,
38128643-38128744,38130893-38130956
Length = 500
Score = 35.5 bits (78), Expect = 0.031
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +3
Query: 318 HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSL 497
H + + +GSG+LA+P + +G + G I VV A I + +L R +
Sbjct: 64 HAITAVIGSGVLALPWSVAQMGWVLGPIALVVCAYITYYTAVLLCDCYRTPDPVHGKRNY 123
Query: 498 SYTDTCETVFKIGPR 542
+Y D + +GPR
Sbjct: 124 TYMDVVRSC--LGPR 136
>02_01_0018 + 119890-120238,120331-120424,120518-121529
Length = 484
Score = 34.3 bits (75), Expect = 0.072
Identities = 24/107 (22%), Positives = 48/107 (44%)
Frame = +3
Query: 189 EDMPSKTQSTITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSGILAMPMA 368
+D +T +T +D +D V++D T+ S H++ + +GSG+L++ A
Sbjct: 10 QDHQVETMTTKKIDEEDEEVDDDGRAKRRGTVWTAAS------HIITAVIGSGVLSLAWA 63
Query: 369 FKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSLSYTD 509
+G + G ++ A + ++L R AT + +Y D
Sbjct: 64 IAQLGWVVGPTVMLLFAAVIYFTSNLLADCYRTGDPATGRRNYTYMD 110
>07_01_0248 -
1821340-1821996,1823619-1823761,1824239-1824453,
1825911-1826049,1826152-1826385,1826504-1826624
Length = 502
Score = 33.9 bits (74), Expect = 0.095
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 285 EHKTST-IGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTS 461
E +T T + A H++ + +GSG+L++ A +G + G V +VI C +L
Sbjct: 37 EKRTGTLVTASAHIITAVIGSGVLSLAWAIAQLGWVIGPAVLVAFSVITWFCSSLLADCY 96
Query: 462 R 464
R
Sbjct: 97 R 97
>01_06_1540 -
38111557-38111985,38112087-38112311,38112494-38112854,
38112965-38113058,38113136-38113369,38113891-38113945
Length = 465
Score = 33.9 bits (74), Expect = 0.095
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +3
Query: 285 EH-KTSTIG-AFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVST 458
EH +T T+ A H++ + +GSG+LA+ + +G + G + A + + +L +
Sbjct: 14 EHERTGTVWTATAHIVTAVIGSGVLALAWSVAQLGWVAGPLALAGFACVTYYTSTLLANA 73
Query: 459 SRDVCKATKTPSLSYTDTCETVFKIGPRKL 548
R T T + +Y D + + PR++
Sbjct: 74 YRAPHPVTGTRNRTYMDAVRSY--LSPREV 101
>04_04_0140 -
23073032-23073130,23073270-23073338,23073448-23073539,
23073637-23074550,23074646-23074779,23075003-23075058,
23077556-23077646
Length = 484
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +3
Query: 309 AFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILV 452
A FH + + +G+G+L++P A ++G PG+ VV + + + +L+
Sbjct: 69 ATFHSVTAMVGAGVLSLPYAMAHLGWGPGTAALVVSWGMTLYTLRLLI 116
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +3
Query: 318 HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILV 452
+++ S +G+G+L +P AF+ G + G++G +C+ +L+
Sbjct: 24 NIVVSIVGTGVLGLPYAFRTSGWLAGALGVAGAGAATFYCMLLLL 68
>12_01_0853 +
7996492-7996667,7996751-7997655,7998533-7998624,
7998751-7998819,7998949-7999047
Length = 446
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 315 FHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILV 452
FH + + +G+G+L++P A +G PG ++ VI + + +V
Sbjct: 36 FHNVTAMVGAGVLSLPFAMSELGWGPGVAAMIMSWVITLYTLWQMV 81
>12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551
Length = 475
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +3
Query: 318 HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSL 497
H++ + +GSG+L++ A +G + G ++ A + + +L R AT +
Sbjct: 44 HIITAVIGSGVLSLAWAIAQLGWVAGPAVMLLFAFVIYYTSTLLAECYRTGDPATGKRNY 103
Query: 498 SYTD 509
+Y D
Sbjct: 104 TYMD 107
>12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660
Length = 475
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +3
Query: 318 HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSL 497
H++ + +GSG+L++ A +G + G ++ A + + +L R AT +
Sbjct: 44 HIITAVIGSGVLSLAWAIAQLGWVAGPAVMLLFAFVIYYTSTLLAECYRTGDPATGKRNY 103
Query: 498 SYTD 509
+Y D
Sbjct: 104 TYMD 107
>11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360
Length = 445
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/78 (21%), Positives = 35/78 (44%)
Frame = +3
Query: 318 HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSL 497
H++ + +GSG+L++ A +G + G ++ A + + +L R T +
Sbjct: 39 HIITAVIGSGVLSLAWAIAQLGWVAGPAVMLLFAFVIYYTSTLLAECYRSGDPCTGKRNY 98
Query: 498 SYTDTCETVFKIGPRKLR 551
+Y D +G K+R
Sbjct: 99 TYMDAVRA--NLGGSKVR 114
>08_01_0185 +
1558580-1558755,1558848-1559737,1559828-1559919,
1560018-1560086,1560218-1560316
Length = 441
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 315 FHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIAT 431
FH + + +G+G+L++P A +G PG I ++++ I T
Sbjct: 36 FHNVTAMVGAGVLSLPYAMSELGWGPG-IAVLILSWIIT 73
>06_03_0442 +
20837492-20837621,20841842-20842075,20842435-20842528,
20842653-20842870,20842956-20843095,20843231-20843878
Length = 487
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/64 (21%), Positives = 32/64 (50%)
Frame = +3
Query: 318 HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSL 497
H++ + +GSG+L++ A +G + G + ++ A+I + +L R + +
Sbjct: 52 HIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFALITYYTSGLLADCYRTGDPVSGKRNY 111
Query: 498 SYTD 509
+Y D
Sbjct: 112 TYMD 115
>04_04_0795 -
28111155-28111649,28111747-28112405,28112499-28112635,
28112747-28113093
Length = 545
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +3
Query: 309 AFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKT 488
A FH L S +G L +P+AF +G I V + + +LV V T+
Sbjct: 91 AAFHSLSSGIGFQALVLPVAFSLLGWTWAIICLTVAFAWQLYTLWLLVKLHEPVAGGTRY 150
Query: 489 PSLSYTDTCETVF 527
Y T TVF
Sbjct: 151 SRYMYLAT--TVF 161
>01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708
Length = 488
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/64 (21%), Positives = 31/64 (48%)
Frame = +3
Query: 318 HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSL 497
H++ + +GSG+L++ A +G + G V+ +++ + +L R T +
Sbjct: 51 HIITAVIGSGVLSLGWAIAQLGWVAGPAVMVLFSLVTYYTSSLLSDCYRSGDPVTGKRNY 110
Query: 498 SYTD 509
+Y D
Sbjct: 111 TYMD 114
>06_01_0873 -
6693397-6694038,6694231-6694370,6694713-6694930,
6695040-6695133,6695247-6695483,6696192-6696260,
6696513-6696636
Length = 507
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +3
Query: 318 HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVS 455
H++ + +GSG+L++ + +G + G VV AVI T+ +L++
Sbjct: 73 HIVTAVVGSGVLSLAWSTAQLGWVAGPATLVVFAVI-TYYTSVLLA 117
>02_05_0975 + 33227431-33227730,33228556-33228636,33228883-33229680,
33230829-33231005,33231159-33231274,33231422-33231520,
33231598-33232040,33232147-33232184,33232343-33232600,
33233378-33233525,33233989-33234108,33234884-33234984,
33235090-33235213,33235386-33235498,33236103-33236214,
33236298-33236432,33236527-33236593,33236685-33236741,
33236774-33236900,33237221-33237338,33237418-33237929
Length = 1347
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 374 EHRSHSWVYRN-CRSGCYSHALCTYPCF 454
E SH++ N +SG Y H CT PCF
Sbjct: 1108 ESASHAFFLENGLKSGLYIHNGCTQPCF 1135
>12_01_0599 - 4892146-4893552
Length = 468
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 318 HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVV 413
H++ + +GSG+L++P A +G + G VV
Sbjct: 40 HIITAVIGSGVLSLPWATAQLGWVGGPAVMVV 71
>07_03_1583 -
27898375-27898436,27898455-27898539,27898621-27898768,
27899009-27899028,27899135-27899236,27899743-27899812,
27899956-27900012,27902324-27902484,27902742-27902761,
27902997-27903069,27903077-27903169,27903456-27903496,
27903597-27903858
Length = 397
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/73 (17%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 186 NEDMPSKTQSTITLDRKDAVVENDYNPFEHRTLEHKTSTI-GAFFHLLKSSLGSGILAMP 362
++ K S +++ +E ++ T++H+ ++ + F + +++G+GILA+P
Sbjct: 51 SQQYAEKQSSGSQQQQQNQQLERLFSNLNQATMKHEPGSVTSSIFLVAGTTVGAGILAIP 110
Query: 363 MAFKNIGLIPGSI 401
+ G + ++
Sbjct: 111 AVTQEAGFLASAV 123
>04_04_1451 +
33695734-33695806,33695946-33696179,33696341-33696434,
33696532-33696749,33696859-33696992,33697098-33697325,
33697417-33697845
Length = 469
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +3
Query: 318 HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSL 497
H++ + +G G+LA+ + +G + G I V A + +L R +
Sbjct: 33 HIITAVIGCGVLALSWSVAQLGWVAGPIAMVCFAFVTYISAFLLSHCYRSPGSEKMQRNY 92
Query: 498 SYTD 509
SY D
Sbjct: 93 SYMD 96
>01_04_0076 +
15780981-15780996,15781277-15783109,15783186-15783304,
15783422-15783724
Length = 756
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +3
Query: 129 YTAEKSFK--MISENFSVSGSNEDMPSKTQSTITL----DRKDAVVENDYNPFEHRTLEH 290
+T +K +K I E+ S++ + +K Q+T+T +R++ E F ++ H
Sbjct: 154 HTIDKYYKPPSIEESASMTQRVIKLSNKVQTTLTTQKREERRNRTCEYICQWFYEASIPH 213
Query: 291 KTSTIGAFFHLLKS 332
T T+ +F H+L++
Sbjct: 214 NTVTLPSFAHMLEA 227
>10_06_0188 - 11603941-11604528
Length = 195
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 219 SLTGFLMACPHCCR*H*NFPKSF 151
S F ACPHCC H ++P+ +
Sbjct: 11 SAAAFWTACPHCCYVH-SYPRHY 32
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 520 VSQVSV*LKDGVFVALHTSLDVETRI 443
VS S LKDG +A+H+S +++T++
Sbjct: 627 VSAASAALKDGDVIAIHSSSELDTKL 652
>04_04_0338 +
24509698-24510042,24510373-24510490,24510539-24510642,
24510823-24511491
Length = 411
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/64 (21%), Positives = 29/64 (45%)
Frame = +3
Query: 318 HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSL 497
H++ + +GSG+L++ +G + G ++ + C +LV R T +
Sbjct: 42 HIITAVIGSGVLSLAWGVAQLGWVAGPAVMLLFGAVIYCCSVLLVECYRTGDPYTGQRNR 101
Query: 498 SYTD 509
+Y D
Sbjct: 102 TYMD 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,142,673
Number of Sequences: 37544
Number of extensions: 300769
Number of successful extensions: 735
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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