Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11i08f
         (582 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    25   1.4  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    25   1.8  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   5.5  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   9.5  

>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 487 VFVALHTSLDVETRICTQCVAITATTTVPIDPGMRPMFL 371
           +F  +  SL V T +C   V   +T+T  + P +R +FL
Sbjct: 313 LFTMILVSLSVWTTVCVLNVWYRSTSTHKMSPFVRRLFL 351


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 404 NCRSGCYSHALCTYPC 451
           NC +GC   + CT PC
Sbjct: 16  NCGAGCGCESRCTCPC 31


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 349 IPDPNEDFSRWKKAPMVDVLCSNVLCSKG 263
           IP+PN D  +W K   V+ L S +  S G
Sbjct: 72  IPEPNADRDQWGKG--VEFLLSCIAMSVG 98


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 211 WVFDGMSSLLPLTLKFSEII 152
           W F+  + +LP+TL  +++I
Sbjct: 271 WSFETSTDMLPITLVLTQLI 290


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,543
Number of Sequences: 2352
Number of extensions: 12639
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)