Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11i08f
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 62 2e-10
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 47 8e-06
Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 35 0.037
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 31 0.45
AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical ... 30 1.0
U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 30 1.4
AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical... 29 2.4
U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 28 5.6
AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 28 5.6
AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 28 5.6
AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeri... 27 7.4
AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein, su... 27 7.4
AF039052-10|AAF98634.1| 536|Caenorhabditis elegans Hypothetical... 27 7.4
AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alp... 27 7.4
AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s... 27 7.4
Z77660-6|CAB01177.1| 197|Caenorhabditis elegans Hypothetical pr... 27 9.7
U40944-3|ABC71813.1| 111|Caenorhabditis elegans Hypothetical pr... 27 9.7
U40944-2|ABC71812.1| 306|Caenorhabditis elegans Hypothetical pr... 27 9.7
U40944-1|AAA81718.3| 341|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF024503-5|AAG24096.1| 330|Caenorhabditis elegans Serpentine re... 27 9.7
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +3
Query: 192 DMPSKTQSTITLDRKDAVVENDYNPFEHRT-LEHKTSTIGAFFHLLKSSLGSGILAMPMA 368
+ P T+ + R++ V E D + F+ R E+ + AF H++K+ LG+G+L++P+A
Sbjct: 17 EAPGDTE--VQTPRRNTVSE-DTSLFQDRLPTENSLTPEQAFIHMVKAMLGTGLLSLPLA 73
Query: 369 FKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSLSYTDTCETVFKIGP 539
FK+ GL G I TV++ +I +C+ +V + VC + Y + ++GP
Sbjct: 74 FKHSGLFLGLILTVLICLICLYCMRQVVFAAHFVCNRNGRDLIDYANIMRGAVEMGP 130
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 47.2 bits (107), Expect = 8e-06
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +3
Query: 267 FEHRTLEHKTSTIG-AFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVH 443
F R + ++ T A H++K +G+G+L++P+AFK+ G+ G I + +I +C
Sbjct: 29 FASRVRDSRSITADQALIHMIKVMMGTGMLSLPLAFKHSGIWLGLILLCFICLICIYCTR 88
Query: 444 ILVSTSRDVCKATKTPSLSYTDTCETVFKIGPRKLR 551
L+ + + + Y + + ++GP +R
Sbjct: 89 QLIFGQHYITFIKREQRMDYANVMRSAVELGPAWIR 124
>Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical
protein F13H10.3c protein.
Length = 583
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Frame = +3
Query: 264 PFEH-RTLEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCV 440
PFE + + K +I F + + +G+ +LAMP A + GL+ G I + +A I +
Sbjct: 120 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 179
Query: 441 HILVSTSRDVCKATKTPSLS-YTDTCETVF-KIG 536
+I++ + + + + P L+ ++D C+++F +IG
Sbjct: 180 YIVIESPKRLQDLSVDPLLAEFSDVCKSLFGRIG 213
>Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical
protein F13H10.3b protein.
Length = 617
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Frame = +3
Query: 264 PFEH-RTLEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCV 440
PFE + + K +I F + + +G+ +LAMP A + GL+ G I + +A I +
Sbjct: 154 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 213
Query: 441 HILVSTSRDVCKATKTPSLS-YTDTCETVF-KIG 536
+I++ + + + + P L+ ++D C+++F +IG
Sbjct: 214 YIVIESPKRLQDLSVDPLLAEFSDVCKSLFGRIG 247
>Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical
protein F13H10.3a protein.
Length = 615
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Frame = +3
Query: 264 PFEH-RTLEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCV 440
PFE + + K +I F + + +G+ +LAMP A + GL+ G I + +A I +
Sbjct: 152 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 211
Query: 441 HILVSTSRDVCKATKTPSLS-YTDTCETVF-KIG 536
+I++ + + + + P L+ ++D C+++F +IG
Sbjct: 212 YIVIESPKRLQDLSVDPLLAEFSDVCKSLFGRIG 245
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 44.0 bits (99), Expect = 8e-05
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +3
Query: 285 EHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSR 464
+ K S+ A +L+K LG+G ++P+AFK G + G + VV+ + C+ LV +
Sbjct: 73 KEKISSKFALINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAG 132
Query: 465 DVCKATKTPSLSYTDTC--ETVFKIGP-RKLRPYS 560
+ K ++ L Y + T P RKL P S
Sbjct: 133 YLSKVNQSAPLDYGNMAYKATQASYTPIRKLAPVS 167
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = +3
Query: 282 LEHKTSTIGAFF---HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILV 452
LEH I + F +L+K LG+G ++P+AFK G + G + VV+ + C+ LV
Sbjct: 14 LEHYKKAISSKFALINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLV 73
Query: 453 STSRDVCKATKTPSLSYTDTC--ETVFKIGP-RKLRPYS 560
+ + K ++ L Y + T P RKL P S
Sbjct: 74 KCAGYLSKVNQSAPLDYGNMAYKATQASYTPIRKLAPVS 112
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 35.1 bits (77), Expect = 0.037
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 285 EHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHIL 449
+HK + A ++ +G G++AMP+AFK GL G + + VAV + ++L
Sbjct: 41 KHKIGWVIAAIFIIADMVGGGVVAMPVAFKLSGLPMGILIMLTVAVSFEYTGYLL 95
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 31.5 bits (68), Expect = 0.45
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = +3
Query: 339 GSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHIL 449
GSG++A+P A +++G + G+I +V+ +I + +L
Sbjct: 20 GSGLVALPSAMQSLGFMGGTITLIVMCLITYYTATLL 56
>AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical
protein Y51F10.4 protein.
Length = 598
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 315 FHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHIL 449
F+L +G +LAMP F+ G++ +I + AV+ H L
Sbjct: 56 FNLANCIIGVSVLAMPYVFQQCGILLAAIMIALCAVLTKLTCHFL 100
>U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical
protein R02F2.8 protein.
Length = 494
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 303 IGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSI 401
IGA F ++ + G G++A+ A ++GLIPG I
Sbjct: 28 IGAIF-IIGETAGGGMIALSYALTSMGLIPGLI 59
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +3
Query: 321 LLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSLS 500
++ + G G++A+P A + G + G+ +V AV+ T+ IL++ + + +
Sbjct: 20 IVGETAGGGLIALPTAIVSTGAVTGAFLLLVAAVVCTY-TGILLAENWTILQELYP---E 75
Query: 501 YTDTCETVF-KIGPRKLRPYSLH 566
Y D C + +G R + P H
Sbjct: 76 YRDHCRKPYPAMGLRAIGPKFAH 98
>AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical
protein Y18D10A.23 protein.
Length = 503
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/65 (21%), Positives = 35/65 (53%)
Frame = +3
Query: 234 KDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVV 413
+++ V D + H + H S + A ++ +G+G++++P+A GLI G + ++
Sbjct: 21 ENSTVSTDSSSTYHNS--HGISWLMAAVFIVGDMMGAGMISLPLALGRSGLIAGCVLILL 78
Query: 414 VAVIA 428
++ +
Sbjct: 79 ASIFS 83
>U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein.
Length = 415
Score = 27.9 bits (59), Expect = 5.6
Identities = 23/101 (22%), Positives = 43/101 (42%)
Frame = +3
Query: 141 KSFKMISENFSVSGSNEDMPSKTQSTITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFH 320
+S K + G+N + ++ I + DA+ E R ++ T G
Sbjct: 308 QSAKQDLPTYDYWGTNNSLNDIMENEILSRKYDALSAWSSMRLEKR---EESPTNGLMSS 364
Query: 321 LLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVH 443
L +S G G+L+ + N+ L PGS+ + + ++ C H
Sbjct: 365 LKGTSAGFGLLSTIWSGGNMNLSPGSLASASASPTSSTCDH 405
>AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess
protein 3, isoform a protein.
Length = 415
Score = 27.9 bits (59), Expect = 5.6
Identities = 23/101 (22%), Positives = 43/101 (42%)
Frame = +3
Query: 141 KSFKMISENFSVSGSNEDMPSKTQSTITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFH 320
+S K + G+N + ++ I + DA+ E R ++ T G
Sbjct: 308 QSAKQDLPTYDYWGTNNSLNDIMENEILSRKYDALSAWSSMGLEKR---EESPTNGLMSS 364
Query: 321 LLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVH 443
L +S G G+L+ + N+ L PGS+ + + ++ C H
Sbjct: 365 LKGTSAGFGLLSTIWSGGNMNLSPGSLASASASPTSSTCDH 405
>AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess
protein 3, isoform b protein.
Length = 443
Score = 27.9 bits (59), Expect = 5.6
Identities = 23/101 (22%), Positives = 43/101 (42%)
Frame = +3
Query: 141 KSFKMISENFSVSGSNEDMPSKTQSTITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFH 320
+S K + G+N + ++ I + DA+ E R ++ T G
Sbjct: 336 QSAKQDLPTYDYWGTNNSLNDIMENEILSRKYDALSAWSSMGLEKR---EESPTNGLMSS 392
Query: 321 LLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVH 443
L +S G G+L+ + N+ L PGS+ + + ++ C H
Sbjct: 393 LKGTSAGFGLLSTIWSGGNMNLSPGSLASASASPTSSTCDH 433
>AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 375
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 225 LDRKDAVVENDYNPFEHRTLEHKTSTIGAF 314
LD+ D V +N+Y+P E L + T G F
Sbjct: 160 LDKVDVVRQNNYDPSEQDILRCRVMTTGIF 189
>AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein,
subunit alpha protein 1 protein.
Length = 375
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 225 LDRKDAVVENDYNPFEHRTLEHKTSTIGAF 314
LD+ D V +N+Y+P E L + T G F
Sbjct: 160 LDKVDVVRQNNYDPSEQDILRCRVMTTGIF 189
>AF039052-10|AAF98634.1| 536|Caenorhabditis elegans Hypothetical
protein T22D1.1 protein.
Length = 536
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 263 SF*TQDVRTQDINHRSFLPPTEIFVGIRYLSDAYG 367
SF T+D+ ++H FLP F+G+R+ S + G
Sbjct: 500 SFWTKDIGCYQVHH--FLPQETCFLGVRHCSFSLG 532
>AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 375
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 225 LDRKDAVVENDYNPFEHRTLEHKTSTIGAF 314
LD+ D V +N+Y+P E L + T G F
Sbjct: 160 LDKVDVVRQNNYDPSEQDILRCRVMTTGIF 189
>AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s)
subunit protein.
Length = 375
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 225 LDRKDAVVENDYNPFEHRTLEHKTSTIGAF 314
LD+ D V +N+Y+P E L + T G F
Sbjct: 160 LDKVDVVRQNNYDPSEQDILRCRVMTTGIF 189
>Z77660-6|CAB01177.1| 197|Caenorhabditis elegans Hypothetical
protein F38H4.6 protein.
Length = 197
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 228 DRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSGILAMPMAF 371
D+KDA+ +N Y F H T + +T+ L +S G+ +P +F
Sbjct: 151 DKKDAISKNHYFAFYHTTSDGRTAR-----ELWANSKVEGVRRLPASF 193
>U40944-3|ABC71813.1| 111|Caenorhabditis elegans Hypothetical
protein PDB1.1c protein.
Length = 111
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 55 VIRSLQIRLKPFNFMSEFLVYCDYNIRLRNHL 150
V SLQ++L+ F+ V+CDY H+
Sbjct: 80 VAESLQVKLEKLPFVERAFVHCDYKFDGDEHV 111
>U40944-2|ABC71812.1| 306|Caenorhabditis elegans Hypothetical
protein PDB1.1b protein.
Length = 306
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 55 VIRSLQIRLKPFNFMSEFLVYCDYNIRLRNHL 150
V SLQ++L+ F+ V+CDY H+
Sbjct: 275 VAESLQVKLEKLPFVERAFVHCDYKFDGDEHV 306
>U40944-1|AAA81718.3| 341|Caenorhabditis elegans Hypothetical
protein PDB1.1a protein.
Length = 341
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 55 VIRSLQIRLKPFNFMSEFLVYCDYNIRLRNHL 150
V SLQ++L+ F+ V+CDY H+
Sbjct: 310 VAESLQVKLEKLPFVERAFVHCDYKFDGDEHV 341
>AF024503-5|AAG24096.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein246 protein.
Length = 330
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 384 LIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSLSYT--DTCETVFK 530
+IP TVVV V+ T V V T +++ K K ++S +T +T FK
Sbjct: 189 IIPAVCTTVVVTVMITPTVTFFVLTLKNLFKENKVFNISRKTFETQQTFFK 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,512,650
Number of Sequences: 27780
Number of extensions: 280107
Number of successful extensions: 758
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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