Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11i07r
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ278684-1|CAB99191.1|  488|Drosophila melanogaster gag-like pro...    32   0.88 
BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p pro...    30   3.6  
AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC...    30   3.6  
AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA...    30   3.6  

>AJ278684-1|CAB99191.1|  488|Drosophila melanogaster gag-like
           protein protein.
          Length = 488

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 23/76 (30%), Positives = 35/76 (46%)
 Frame = +3

Query: 246 DTLATVVETIVSKLKLMDFNTSNISRCHRMGKTFTPERSRPILLKLCDMNLRSKVWAAKT 425
           +TLAT V T  + LK MDF +    R      + +P RS  +   L + +L+  +   K 
Sbjct: 59  ETLATTVSTTATSLKTMDFISVPAQRAGAKSPSGSPHRSPELTTTLQNEDLQGILDMMKA 118

Query: 426 SLKGSGITLSEFLTKR 473
            +      LS F T+R
Sbjct: 119 KITA---ILSSFETRR 131


>BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p protein.
          Length = 1664

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = +3

Query: 141  LQTQVELISLENDRLEMHSRRKILLIHGVPE---QQKEDTLATVVETIVSKLK 290
            LQ ++  +SLEN+RL+ H  R+I  +H   E    +   TL    + ++S+L+
Sbjct: 1327 LQARIAGLSLENERLKQHYDRQINDLHRTSELMISEMRKTLEQEHKRVISELR 1379


>AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC,
            isoform C protein.
          Length = 1664

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = +3

Query: 141  LQTQVELISLENDRLEMHSRRKILLIHGVPE---QQKEDTLATVVETIVSKLK 290
            LQ ++  +SLEN+RL+ H  R+I  +H   E    +   TL    + ++S+L+
Sbjct: 1327 LQARIAGLSLENERLKQHYDRQINDLHRTSELMISEMRKTLEQEHKRVISELR 1379


>AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA,
            isoform A protein.
          Length = 1674

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = +3

Query: 141  LQTQVELISLENDRLEMHSRRKILLIHGVPE---QQKEDTLATVVETIVSKLK 290
            LQ ++  +SLEN+RL+ H  R+I  +H   E    +   TL    + ++S+L+
Sbjct: 1337 LQARIAGLSLENERLKQHYDRQINDLHRTSELMISEMRKTLEQEHKRVISELR 1389


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,854,149
Number of Sequences: 53049
Number of extensions: 674105
Number of successful extensions: 2262
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2256
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)