Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11i01r
         (779 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   4.2  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   7.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   7.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   9.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 288 VIKRIVLSGHPYKVHKKSAVIRFMFFNREDIVY 190
           + KRI+   H YK+H+K        +N+++I+Y
Sbjct: 421 IYKRIIDYYHSYKMHQKP-------YNKDEIIY 446


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 288 VIKRIVLSGHPYKVHKKSAVIRFMFFNREDIVY 190
           + KRI+   H YK+H+K        +N+++I+Y
Sbjct: 421 IYKRIIDYYHSYKMHQKP-------YNKDEIIY 446


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 404 KDATQVDAGWKNLS 445
           KD+T  + GWKN S
Sbjct: 146 KDSTNCNCGWKNPS 159


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +1

Query: 316 YASCYKLQLCVLFFLKA*HCRWTELYRC 399
           Y  C K Q C +  +    C++  L +C
Sbjct: 52  YRPCTKNQQCSILRINRNRCQYCRLKKC 79


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +1

Query: 316 YASCYKLQLCVLFFLKA*HCRWTELYRC 399
           Y  C K Q C +  +    C++  L +C
Sbjct: 101 YRPCTKNQQCSILRINRNRCQYCRLKKC 128


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 382 TELYRCKERCN 414
           T +Y C +RCN
Sbjct: 469 TPIYECNKRCN 479


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +1

Query: 112  HMTVSTQRFFDVSSTPILRS*FTGLEVNYIFSVKEHESYDG 234
            H+T    RF+ +SS+P +     G +++   +V ++++ DG
Sbjct: 890  HLTPLQPRFYSISSSPDVHQ---G-QIHLTVAVVQYKTQDG 926


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,674
Number of Sequences: 438
Number of extensions: 4589
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)