Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11h24f
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    25   2.7  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   2.7  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   3.6  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.3  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 116 NCSPRQ-FRHLDFVSQFTTDIR 178
           N +PR  FRHLDF +  T ++R
Sbjct: 119 NPNPRSPFRHLDFSTSATAELR 140


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 116 NCSPRQ-FRHLDFVSQFTTDIR 178
           N +PR  FRHLDF +  T ++R
Sbjct: 119 NPNPRSPFRHLDFSTSATAELR 140


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +2

Query: 209 DTLSRIEEIAQPIDLEQVAKAQQGDNEIKDLLEDNSSL 322
           + + R     + IDLE  A+ ++ +NEI +L E+N++L
Sbjct: 84  EVIPRTPNSREIIDLE--AQLEKTENEIVELSENNNAL 119


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +2

Query: 446  LSHPGANATAKLVSERYVWPGVRKDCREWVRTCLACQRSKVTRHVYSPIA 595
            L H GA      +  R+   G R   +  V  C+ C R +  + +  P+A
Sbjct: 1361 LRHAGAQLMINTMQLRFWIVGARNVAKRTVFNCVKCTRCR-PKLIQQPMA 1409


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,507
Number of Sequences: 2352
Number of extensions: 14155
Number of successful extensions: 67
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)