Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11h24f
         (646 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK000132-1|BAA90963.1|  392|Homo sapiens protein ( Homo sapiens ...    42   0.002
BC015325-1|AAH15325.1|  222|Homo sapiens ZH2C2 protein protein.        41   0.003
AK021873-1|BAB13925.1|  150|Homo sapiens protein ( Homo sapiens ...    35   0.22 
AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein.     35   0.22 
U69274-1|AAD00172.1| 1053|Homo sapiens zinc finger protein protein.    30   6.1  
BC111700-1|AAI11701.1| 1053|Homo sapiens zinc finger and BTB dom...    30   6.1  

>AK000132-1|BAA90963.1|  392|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20125 fis, clone COL06152. ).
          Length = 392

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = +2

Query: 401 IPKQFRRQVFQSLH---SLSHPGANATAKLVSERYVWPGVRKDCREWVRTCLACQRSKVT 571
           + ++ +++V +  H   S +H G + T  LV   Y W  V  D ++WV  C  CQ +K T
Sbjct: 65  VSEEEKKKVLRECHENDSGAHHGISRTLTLVESNYYWTSVTNDAKQWVYACQHCQVAKNT 124


>BC015325-1|AAH15325.1|  222|Homo sapiens ZH2C2 protein protein.
          Length = 222

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = +2

Query: 401 IPKQFRRQVFQSLH---SLSHPGANATAKLVSERYVWPGVRKDCREWVRTCLACQRSKVT 571
           + ++ +++V +  H   S +H G + T  LV   Y W  V  D ++WV  C  CQ +K T
Sbjct: 65  VSEEEKKKVLRECHENDSGAHHGISRTLTLVESNYYWTSVTNDVKQWVYACQHCQVAKNT 124


>AK021873-1|BAB13925.1|  150|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11811 fis, clone HEMBA1006349. ).
          Length = 150

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +2

Query: 401 IPKQFRRQVFQSLHSL---SHPGANATAKLVSERYVWPGVRKDCREWVRTCLAC 553
           +P Q RR +  S+H +   +H     T K +     WPG+++  +++ R+CL C
Sbjct: 65  VPTQLRRDLIFSVHDIPLGAHQRPEETYKKLRLLGWWPGMQEHVKDYCRSCLFC 118


>AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein.
          Length = 1819

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +2

Query: 401  IPKQFRRQVFQSLHSL---SHPGANATAKLVSERYVWPGVRKDCREWVRTCLAC 553
            +P Q RR +  S+H +   +H     T K +     WPG+++  +++ R+CL C
Sbjct: 1457 VPTQLRRDLIFSVHDIPLGAHQRPEETYKKLRLLGWWPGMQEHVKDYCRSCLFC 1510


>U69274-1|AAD00172.1| 1053|Homo sapiens zinc finger protein protein.
          Length = 1053

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +2

Query: 416 RRQVFQSLH---SLSHPGANATAKLVSERYVWPGVRKDCREWVRTCLACQ 556
           RR + ++ H     +H   + T   +S+ Y W G+ K  +++++ C  CQ
Sbjct: 71  RRDLIEAAHLGPGGTHHTRHQTWHYLSKTYWWRGILKQVKDYIKQCSKCQ 120


>BC111700-1|AAI11701.1| 1053|Homo sapiens zinc finger and BTB domain
           containing 11 protein.
          Length = 1053

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +2

Query: 416 RRQVFQSLH---SLSHPGANATAKLVSERYVWPGVRKDCREWVRTCLACQ 556
           RR + ++ H     +H   + T   +S+ Y W G+ K  +++++ C  CQ
Sbjct: 71  RRDLIEAAHLGPGGTHHTRHQTWHYLSKTYWWRGILKQVKDYIKQCSKCQ 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,419,992
Number of Sequences: 237096
Number of extensions: 2073032
Number of successful extensions: 8739
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8739
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)