Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11h23r
(731 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0843 - 32374830-32374958,32375407-32375482,32375572-323756... 35 0.077
12_01_1073 + 11135853-11137388,11137627-11137846,11137990-111381... 34 0.13
12_02_1091 - 26001129-26001181,26001292-26001325,26001339-260014... 32 0.54
10_08_0485 + 18235597-18236256,18236353-18236400,18236522-182366... 30 2.2
03_06_0416 - 33780911-33781861 30 2.2
01_05_0791 + 25267885-25267930,25268258-25268713,25268802-252688... 29 2.9
10_06_0159 + 11327059-11327285,11327920-11328142 29 5.0
06_02_0271 + 13618149-13618297,13618311-13618560 29 5.0
03_02_0502 - 8934646-8934834,8934974-8935121,8935228-8935304,893... 29 5.0
03_02_0082 - 5515019-5515087,5515178-5515285,5516032-5516148,551... 29 5.0
02_02_0431 - 10152228-10152352,10152688-10152919,10153602-101538... 29 5.0
11_06_0621 + 25587476-25587604,25588230-25588423,25588800-255888... 28 6.6
11_06_0145 - 20615044-20617167,20617444-20618076 28 6.6
04_04_0100 + 22796919-22796978,22797065-22797577 28 6.6
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 28 6.6
02_02_0322 - 8938101-8938149,8938235-8938458,8938545-8938605,893... 28 6.6
02_01_0381 - 2764331-2764342,2768966-2769907 28 6.6
12_02_0893 + 24077634-24078379,24079347-24080412,24080741-240808... 28 8.8
07_03_1790 - 29536497-29536625,29536734-29536848,29537357-295375... 28 8.8
04_04_0799 + 28143878-28145042,28145127-28145290,28146008-281460... 28 8.8
03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917 28 8.8
>01_06_0843 -
32374830-32374958,32375407-32375482,32375572-32375693,
32375834-32375908,32376007-32376142,32376223-32376311,
32377304-32377466,32379772-32379860,32379983-32380061,
32380195-32380240,32380718-32380801,32380919-32380982,
32381103-32381156,32381279-32381347,32381470-32381778
Length = 527
Score = 34.7 bits (76), Expect = 0.077
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Frame = -1
Query: 659 AERGRHAIEAARRKTASLETRARSCSPNAHEAVAQYVPVKERRALFESLSRHGGSLARST 480
A R R + R A L RA S ++ A+ + A L++ SLA ++
Sbjct: 61 AARLRQKLADKDRLAAELADRAASLEQALRDSDARLRAALDDNA---KLAKERDSLAHTS 117
Query: 479 EQLARPVVPSETTPRRAASLHDLQAPPTRSVSDLRQFFEAVARGAGPGCGTS-ARHSAPP 303
++LAR + ET R PP + D+R ++VA+ + G + +RH P
Sbjct: 118 KKLARDLAKLETFKRHLMQSLGDDNPPIQETVDIRTCEQSVAKASSWKDGVAHSRHHHPV 177
Query: 302 EAL 294
+L
Sbjct: 178 SSL 180
>12_01_1073 + 11135853-11137388,11137627-11137846,11137990-11138178,
11138257-11138457,11138547-11139246,11163479-11164106
Length = 1157
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = -1
Query: 308 PPEALPSLTCV*YTAHTQICVLSVRFLTSSVA*KLAQICLQWAGKRRQTFQLHTNFS*LL 129
PPE +PSL T H Q+C+ S +A L ++ +QW K FQL LL
Sbjct: 1080 PPEVVPSLPP---THHGQVCLQLETVSQSRLAHGLREVLVQWKNKPVANFQLEDEL--LL 1134
Query: 128 RYRE 117
R R+
Sbjct: 1135 RGRD 1138
>12_02_1091 -
26001129-26001181,26001292-26001325,26001339-26001437,
26002327-26002369,26002389-26002494,26002776-26002818,
26003526-26003579,26003831-26003911,26003997-26004119,
26004197-26004846,26004928-26005554,26005633-26005870,
26006082-26006258,26006373-26006723,26006824-26007111,
26008340-26008462,26008551-26009007,26009115-26009263,
26009466-26009489
Length = 1239
Score = 31.9 bits (69), Expect = 0.54
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = -1
Query: 578 NAHEAVAQYVPVKERRALFESLSRHGGSLARSTEQLARPVVPSETTPRRAASLHDLQAP- 402
++H A +YV K S++ G L R E++ PV E + S+H+ +P
Sbjct: 491 HSHSACVEYVTEKTDGRSGSSITLFSGPLGRVQERIRTPVHAPEPSSPPGISVHETPSPA 550
Query: 401 --PTRSVSDLRQ 372
P +SD+ +
Sbjct: 551 EMPRDEISDMAE 562
>10_08_0485 +
18235597-18236256,18236353-18236400,18236522-18236644,
18237062-18237211,18237702-18237873,18237965-18238025,
18238129-18238237
Length = 440
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -1
Query: 440 PRRAASLHDLQAPPTRSVSDLRQFFEAVARGAGPGCGTSARHSAPPEALPSLTCV 276
P AASLH L PP + V G G +AR PP + ++ CV
Sbjct: 3 PAAAASLHVLVLPPLPPPGCRTRRAAPVLARRGRGVRHAARRDTPPNPVDAVDCV 57
>03_06_0416 - 33780911-33781861
Length = 316
Score = 29.9 bits (64), Expect = 2.2
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Frame = -1
Query: 731 PRAARSESEQGRRYLKRWEGTAGGAERGRHAIEAARRKTASLETRARSCSPNAHEAVAQY 552
P A R S RR+ + +G AGG R RR +L + R P + ++
Sbjct: 110 PAACRPSSALPRRHNRPHDGHAGGGARVTGTFYGHRRARITLAVQER---PGSLPSLVLE 166
Query: 551 VPVKERRALFESLSRHGGSLARSTEQLARP-VVPSETTPRRAASLHDLQAPPTRSVSDLR 375
+ V + L + +S GG + + E RP +PS P AS+ L+ + + R
Sbjct: 167 LGVPTAK-LMQEISTGGGHVRVALECEKRPKKLPS--APPEQASVSLLEEAMWTAYVNGR 223
Query: 374 QFFEAVARGAGPG 336
+ AV R A G
Sbjct: 224 RVGYAVRREASEG 236
>01_05_0791 +
25267885-25267930,25268258-25268713,25268802-25268832,
25268949-25269255
Length = 279
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = -1
Query: 512 SRHGGSLAR--STEQLARPVVPSETTPRRAASLHDLQAPPTRSVSDLRQFFEAVARGAGP 339
S G S R +T +A+P P+ TTP +AS P + S S A G G
Sbjct: 29 SARGASARRGLATVSVAKPSYPTVTTP-MSASTSPSTMPMSSSPSAFPSLATAGGGGGGG 87
Query: 338 GCGT--SARHSAPPEAL 294
G G+ A SA P AL
Sbjct: 88 GGGSWCVASQSASPTAL 104
>10_06_0159 + 11327059-11327285,11327920-11328142
Length = 149
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +1
Query: 400 GGACKSCS-DAARRGVVSDGTTG 465
GG C+ C+ D ARRG V + TG
Sbjct: 118 GGGCRCCAGDTARRGAVEEQLTG 140
>06_02_0271 + 13618149-13618297,13618311-13618560
Length = 132
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 725 AARSESEQGRRYLK-RWEGTAGGAERGRHAIEAARRKTA 612
A R+ E+ RR+ + RW G GG E G +EAA + A
Sbjct: 11 AERTAVERSRRWWRGRWRGRGGGGEGGGE-VEAAVERAA 48
>03_02_0502 -
8934646-8934834,8934974-8935121,8935228-8935304,
8935427-8935497,8935594-8935680,8935852-8936316,
8936406-8936880
Length = 503
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 557 QYVPVKERRALFESLSRHGGSLARSTEQLAR--PVVPSETTPRRAASLHDLQAPPT 396
QYVP +E A + + G + R+ L PV PS+ R +L L APP+
Sbjct: 30 QYVPPEEPSAFAKLYAVAGDVVGRAKALLTTGGPVTPSDDGQRVRRALAQLTAPPS 85
>03_02_0082 -
5515019-5515087,5515178-5515285,5516032-5516148,
5516263-5516382,5518038-5518868
Length = 414
Score = 28.7 bits (61), Expect = 5.0
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 7/130 (5%)
Frame = -1
Query: 731 PRAARSESEQGRR----YLKRWEGTAGGAE--RGRHAIEAARRKTASLETRARSCSPNAH 570
PRAA S GRR ++ + AE R +H AA+ K + R+ CS +
Sbjct: 21 PRAASPSSPGGRRGPTPERRKSVSSVPEAENTRPQHRWPAAKPKASDPLARSLDCSLDRK 80
Query: 569 EAVAQYVPVKERRALFESLSRHGGSLARSTEQLARPV-VPSETTPRRAASLHDLQAPPTR 393
+++ V + R F+S + S + A + S+T + S PP R
Sbjct: 81 DSILAAVHLLRRSMAFDSTTSLSPSDPAAAAAAAHDLSASSDTDSVSSGSNSGAGDPPRR 140
Query: 392 SVSDLRQFFE 363
+S +F++
Sbjct: 141 GISVPARFWQ 150
>02_02_0431 -
10152228-10152352,10152688-10152919,10153602-10153808,
10153915-10154034,10154114-10154260,10155080-10155147,
10155502-10155667,10156765-10156914,10157219-10157335,
10158177-10158281,10159050-10159147,10159594-10159763,
10161489-10161511,10161927-10162006,10162191-10162259,
10163198-10163442,10163614-10163810
Length = 772
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 331 PQPGPAPRATASKN*RRSLTDRVGGACKSCSDAARRGVVSDGTTGRA 471
P+P P PR A + RR+L R + S S A V + RA
Sbjct: 13 PRPAPPPRRCAPRRHRRALAPRAASSSPSPSTAVAAPVYAPTPRDRA 59
>11_06_0621 +
25587476-25587604,25588230-25588423,25588800-25588874,
25589434-25591852
Length = 938
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Frame = +1
Query: 331 PQPGPAPRATASKN*RRSLTDRVGGACKSCSDAARR-----GVVSDGTTGRAS 474
PQP P R A RR+ RVGGA AA+R G GT GR S
Sbjct: 58 PQPVPCARRGAVG--RRAARARVGGAAAGTGSAAQRREQGKGSHQPGTEGRQS 108
>11_06_0145 - 20615044-20617167,20617444-20618076
Length = 918
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 239 H*AHISECVRCITRTSARAGLRVERCA 319
H AH+ +CVR R +AR G R+ A
Sbjct: 45 HLAHVRDCVRTRARVAARRGRRLATAA 71
>04_04_0100 + 22796919-22796978,22797065-22797577
Length = 190
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 391 DRVGGACKSCSDAARRGVVSDGTTGRASCSVLLARLPPCRDNDSNSARRSLTGTYCATAS 570
+R GG + D RG V D +GRA C PPCR N ++ + G YC +
Sbjct: 88 ERWGGLMGAGHDYYERGNV-DVFSGRAPC----LPSPPCRMNLTSDGAGAHHGWYCKSVE 142
Query: 571 -CAFGEH 588
A G H
Sbjct: 143 VTATGPH 149
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 409 CKSCSDAARRGVVSDGTTGRASCSVLLARLPPCRDNDSNSARRSLTGTYCATASCAFGEH 588
CK S AARR + + R+ +LLA L R+ + ARR+L + + AF H
Sbjct: 938 CK-LSSAARR-TMQERDEARSQGKILLAELQARRNAHAMLARRALVSQSASPDAAAFAVH 995
>02_02_0322 -
8938101-8938149,8938235-8938458,8938545-8938605,
8938724-8940761,8940797-8940908,8942037-8942047,
8942293-8942443
Length = 881
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 382 SLTDRVGGACKSCSDAARRGVVSDGTTGRASCSVLLARLPPCRDN 516
S D G A K +AA+ G +G VLL R+ C D+
Sbjct: 118 SSPDNKGAASKDTCEAAQEGEAKNGEAKAEERQVLLDRMAACDDS 162
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 28.3 bits (60), Expect = 6.6
Identities = 31/125 (24%), Positives = 49/125 (39%)
Frame = -1
Query: 617 TASLETRARSCSPNAHEAVAQYVPVKERRALFESLSRHGGSLARSTEQLARPVVPSETTP 438
TAS A + + + + +Y+PV +RRA+ L R +L++P PS +
Sbjct: 5 TASSPATAAAANSDDEDNYEEYIPVAKRRAM------EADRLRRL--RLSKPAPPSSSAA 56
Query: 437 RRAASLHDLQAPPTRSVSDLRQFFEAVARGAGPGCGTSARHSAPPEALPSLTCV*YTAHT 258
A+ L PP S A G G G SA+ S +A HT
Sbjct: 57 EAASDLPPPPPPPPNQPS---------AGGGGGGLEASAKPSLLVKATQLKRAAPEVTHT 107
Query: 257 QICVL 243
+ ++
Sbjct: 108 EQLIM 112
>12_02_0893 +
24077634-24078379,24079347-24080412,24080741-24080866,
24081278-24081384,24081720-24081744
Length = 689
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 725 AARSESEQGRRYLKRWEGTA 666
AA E +GRR ++RWEG A
Sbjct: 167 AACEEEVEGRRRIRRWEGAA 186
>07_03_1790 -
29536497-29536625,29536734-29536848,29537357-29537508,
29537589-29537737,29538936-29539098,29539575-29539686,
29539791-29540152
Length = 393
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 380 LRQFFEAVARGAGPGCGTSARHSAPPEALP 291
LR F +V+ G PG GT PP LP
Sbjct: 54 LRSSFASVSPGPAPGSGTGECPPPPPAPLP 83
>04_04_0799 +
28143878-28145042,28145127-28145290,28146008-28146070,
28146268-28146491,28146850-28147555
Length = 773
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -1
Query: 596 ARSCSPNAHEAVAQYVPVKERRALFESLSRHGGSLARSTEQLARPVVPSETTPRRAASLH 417
ARS P VAQ PV R + S G + A VP+ P+R A+
Sbjct: 154 ARSRPPPPSVGVAQRAPVSTERVYYGSFDPTSG----YPQYYANGGVPATAAPQRMAAPA 209
Query: 416 DLQAPPTRS 390
++PP S
Sbjct: 210 PPRSPPRES 218
>03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917
Length = 447
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 722 ARSESEQGRRYLKRWEGTAGGAERGRHAIEAARRKTASLETRARSCSPN 576
A++ S+ R +A A R +A+ R+ ASLE +A S PN
Sbjct: 335 AKARSQSAPRQRASVSSSASEASSVRWERQASARRRASLEAQAASAPPN 383
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,436,828
Number of Sequences: 37544
Number of extensions: 365833
Number of successful extensions: 1653
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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