Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11h23r
         (731 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    24   4.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.6  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   7.4  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   7.4  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    23   7.4  
AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical prote...    23   9.7  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 602 TRARSCSPNAHEAVAQYVPVKERRA 528
           TRAR    N  +A+  YVPV +++A
Sbjct: 45  TRAREVEFNNKKAIIIYVPVPKQKA 69


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 567  GGGAVRAGQGTPG 529
            GGG++  G GTPG
Sbjct: 2055 GGGSISGGGGTPG 2067


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = -1

Query: 641 AIEAARRKTASLETRARSCSPNA-HEAVAQYVPVKERRALFESLSR 507
           A E  RR+ A    R R C P A     A   PV+ R    +S  R
Sbjct: 488 APEGRRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRRKSTKR 533


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -1

Query: 674 GTAGGAERGRHAIEAARRKTASLETRARSCSPNAHEAVAQ 555
           GTA G     ++ ++ R  T SL    RSC   A   + +
Sbjct: 555 GTAHGRFHNHNSSDSMRTLTTSLTVSRRSCLRPARVVIVE 594


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 362 AVARGAGPGCGTSARHSAPPEALPSLT 282
           A A  A     T+ + S PP A+P+L+
Sbjct: 278 AAATAAAMTTTTTTKKSTPPNAIPALS 304


>AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical protein
           protein.
          Length = 92

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 343 APVAARAPGTALHPKP 296
           AP   R  G A+HPKP
Sbjct: 73  APCYIRKDGRAVHPKP 88


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,675
Number of Sequences: 2352
Number of extensions: 11576
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)