Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11h23r
         (731 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   1.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   1.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   1.7  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    23   3.9  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    23   3.9  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    23   3.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.9  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   5.2  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 306 TRSPALADVRVIHRTHSDMCA*CE 235
           T SP  A  R +  T+S+MCA CE
Sbjct: 200 TWSPDPAINRRLKETYSNMCALCE 223


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 306 TRSPALADVRVIHRTHSDMCA*CE 235
           T SP  A  R +  T+S+MCA CE
Sbjct: 200 TWSPDPAINRRLKETYSNMCALCE 223


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 306 TRSPALADVRVIHRTHSDMCA*CE 235
           T SP  A  R +  T+S+MCA CE
Sbjct: 200 TWSPDPAINRRLKETYSNMCALCE 223


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +1

Query: 352 RATASKN*-RRSLTDRVGGACKSCSDAAR 435
           R TA  N  +R L D +   CK C+D  R
Sbjct: 56  RCTAEGNELKRVLPDALATDCKKCTDKQR 84


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +1

Query: 352 RATASKN*-RRSLTDRVGGACKSCSDAAR 435
           R TA  N  +R L D +   CK C+D  R
Sbjct: 56  RCTAEGNELKRVLPDALATDCKKCTDKQR 84


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +1

Query: 352 RATASKN*-RRSLTDRVGGACKSCSDAAR 435
           R TA  N  +R L D +   CK C+D  R
Sbjct: 56  RCTAEGNELKRVLPDALATDCKKCTDKQR 84


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -1

Query: 485 STEQLARPVVPSETTPRRAASLHDLQAPPTRSVSD 381
           +T+Q  + +  S +  +    +  L+ PP R +SD
Sbjct: 391 NTQQFTQYIPESSSNLQEKTKIDLLEIPPIRKISD 425


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 199 KFVYSGRVNVDKRS 158
           +F+Y G VNV +RS
Sbjct: 86  EFIYHGEVNVHQRS 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,492
Number of Sequences: 438
Number of extensions: 3050
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)