Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11h22f
(567 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 218 1e-56
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 218 1e-56
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 218 1e-56
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 218 1e-56
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 218 1e-56
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 218 1e-56
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 218 1e-56
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 218 1e-56
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 218 1e-56
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 218 1e-56
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 218 1e-56
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 218 1e-56
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 218 1e-56
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 218 1e-56
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 215 1e-55
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 44 3e-04
BC126114-1|AAI26115.1| 579|Homo sapiens cell division cycle 40 ... 29 8.6
BC117145-1|AAI17146.1| 579|Homo sapiens cell division cycle 40 ... 29 8.6
BC111061-1|AAI11062.1| 280|Homo sapiens CDC40 protein protein. 29 8.6
AL671518-2|CAI13322.1| 579|Homo sapiens cell division cycle 40 ... 29 8.6
AL671518-1|CAI13321.1| 539|Homo sapiens cell division cycle 40 ... 29 8.6
AL445068-1|CAI22519.1| 539|Homo sapiens cell division cycle 40 ... 29 8.6
AK222721-1|BAD96441.1| 579|Homo sapiens pre-mRNA splicing facto... 29 8.6
AF061241-1|AAC25166.1| 542|Homo sapiens splicing factor hPRP17 ... 29 8.6
AF038392-1|AAC39730.1| 579|Homo sapiens pre-mRNA splicing facto... 29 8.6
AB208903-1|BAD92140.1| 501|Homo sapiens pre-mRNA splicing facto... 29 8.6
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 218 bits (532), Expect = 1e-56
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 215 bits (524), Expect = 1e-55
Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Frame = +1
Query: 58 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRC TVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65
Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNF 176
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 44.4 bits (100), Expect = 3e-04
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +1
Query: 472 KLATQLRGPLMPVQQPAPKSVARPITEDEKNF 567
KLATQL GP+MPV+ K AR ITE+EKNF
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKNF 33
>BC126114-1|AAI26115.1| 579|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 579
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 499 LMP-VQQPAPKSVARPITEDEK 561
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>BC117145-1|AAI17146.1| 579|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 579
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 499 LMP-VQQPAPKSVARPITEDEK 561
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>BC111061-1|AAI11062.1| 280|Homo sapiens CDC40 protein protein.
Length = 280
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 499 LMP-VQQPAPKSVARPITEDEK 561
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>AL671518-2|CAI13322.1| 579|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 579
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 499 LMP-VQQPAPKSVARPITEDEK 561
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>AL671518-1|CAI13321.1| 539|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 539
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 499 LMP-VQQPAPKSVARPITEDEK 561
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>AL445068-1|CAI22519.1| 539|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 539
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 499 LMP-VQQPAPKSVARPITEDEK 561
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>AK222721-1|BAD96441.1| 579|Homo sapiens pre-mRNA splicing factor
17 variant protein.
Length = 579
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 499 LMP-VQQPAPKSVARPITEDEK 561
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>AF061241-1|AAC25166.1| 542|Homo sapiens splicing factor hPRP17
protein.
Length = 542
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 97 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 155
Query: 499 LMP-VQQPAPKSVARPITEDEK 561
L P + K VA+P E++K
Sbjct: 156 LGPWAKYVDEKDVAKPSREEQK 177
>AF038392-1|AAC39730.1| 579|Homo sapiens pre-mRNA splicing factor
protein.
Length = 579
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 499 LMP-VQQPAPKSVARPITEDEK 561
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>AB208903-1|BAD92140.1| 501|Homo sapiens pre-mRNA splicing factor
17 variant protein.
Length = 501
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 133 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 191
Query: 499 LMP-VQQPAPKSVARPITEDEK 561
L P + K VA+P E++K
Sbjct: 192 LGPWAKYVDEKDVAKPSEEEQK 213
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,371,115
Number of Sequences: 237096
Number of extensions: 1706470
Number of successful extensions: 3786
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3771
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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