Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11h19f
(610 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 44 2e-05
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.025
SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr 3||... 33 0.033
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 29 0.53
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 29 0.70
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 28 1.2
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 28 1.2
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 27 2.1
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 27 2.8
SPCC63.06 |||human WDR89 family WD repeat protein|Schizosaccharo... 27 2.8
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 27 2.8
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 27 2.8
SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyc... 26 3.7
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 26 3.7
SPAC17H9.05 |ebp2||rRNA processing protein Ebp2|Schizosaccharomy... 26 5.0
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 26 5.0
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 25 6.5
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 25 6.5
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 25 6.5
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 25 6.5
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 25 6.5
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 25 8.7
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 8.7
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 44.0 bits (99), Expect = 2e-05
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 135 DDALKWDVDMEIQLFYAMANH-KPVGINKHFQMACIWEKLSNSVTKE-ISTQDIWKHLGS 308
D +W V E L A+ +PVGI K+F M I ++ + + I QD+W LG+
Sbjct: 28 DSVTEWSVLEETLLLKAICRGLRPVGIEKNFYMIGILREIRDGCKRSTIKAQDVWNKLGT 87
Query: 309 LYDFTMLDEAE 341
LY+ +E E
Sbjct: 88 LYNLKEFEELE 98
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 33.5 bits (73), Expect = 0.025
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +3
Query: 417 SKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRKESGSS 596
S LVS T +PS S+ S+S ++S + S + S S +++T +S
Sbjct: 124 SSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTSHRTTS 183
Query: 597 HAST 608
H S+
Sbjct: 184 HKSS 187
>SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 465
Score = 33.1 bits (72), Expect = 0.033
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -1
Query: 250 NFSHIQAIWKCLFIPTGLWLAIA*NNCISISTSHFKASSCF-VSGSSSLETIFN*LIWL 77
NF I I+ LFIP +L + + IS + F +CF + GSSS+ ++ L+WL
Sbjct: 27 NFESILEIFSVLFIP---FLCNSGKKFLQISNASFFLPACFYLLGSSSIIQLYEPLLWL 82
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 29.1 bits (62), Expect = 0.53
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +3
Query: 459 GRSPSPKSTPRSNSKGTASKDN 524
G S SPKSTP SNS G A N
Sbjct: 300 GASVSPKSTPGSNSTGAAVDTN 321
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 28.7 bits (61), Expect = 0.70
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 411 QKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISA 560
+ + V+ ++ D+ PK TP SNS + + +N S K+ S+
Sbjct: 211 ESAAAVIKEDKVSDRKKSKKKPKKTPVSNSTASQASENASDKKTKEKKSS 260
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 408 KQKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRK--DSISALATKTRK 581
K + K+ +E+E ++ SP +T + +GT K+ K + A K K
Sbjct: 180 KAQVKKKRTKDESEQEEAASPKKNNTKKQKVEGTPVKEKKVAFAEKLEQGPTGPAAKKEK 239
Query: 582 ESGSSHA 602
+ SS+A
Sbjct: 240 QQASSNA 246
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = +3
Query: 327 LDEAEPIPFPNHEITFCLPENEFGALMKQ-KSKEVLVSEETEDKDGRSPSPKSTPRSNSK 503
L A PIP ++ + A K SK + S S SP++TP ++
Sbjct: 214 LSTASPIPVRTSSVSSTYLTQDREASSKNCLSKALAFSSIEPPASSASTSPRNTPTPSNN 273
Query: 504 GTASKDNMSKGTRKDSISALATKT 575
GT+ N++ +S + T
Sbjct: 274 GTSINANVTSSLTSNSTGKTSKTT 297
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 381 PENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNS 500
PE+ F L ++K+ + +E E + +P STP+S++
Sbjct: 52 PEDPFANLFQKKTDNKISLKELERQKVGTPDSNSTPKSSN 91
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 26.6 bits (56), Expect = 2.8
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = -1
Query: 406 IKAPNSFSGKQNVIS*LGNGIGSASS-NIVKSY----KLPKCFHI-SWVDISLVTEFDNF 245
I PN F G ++ S N +GS+SS N+V ++ K+P + D+ ++ DN
Sbjct: 374 ISIPNPFQGVESANSDAANNLGSSSSLNLVDTFLTGEKIPLWPLLQKGRDVDVIVAVDNG 433
Query: 244 SHIQAIW 224
+ +W
Sbjct: 434 DDSEWLW 440
>SPCC63.06 |||human WDR89 family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 351 FPNHEITFCLPENEFGALMKQKSKEVLVSEE 443
F NHE F L + G L K+ +K SEE
Sbjct: 273 FSNHETKFVLVDTSTGELKKEPTKLERASEE 303
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 26.6 bits (56), Expect = 2.8
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +3
Query: 411 QKSKEVLVSEETEDKDGRSPSPKSTPRSNSK-----GTASKDNMSKGTRKDSIS 557
Q +E L EE E++D +P P T + NS+ G ASK S+ T D S
Sbjct: 76 QVDEEELEEEEEEEEDA-TPEPVVTSKKNSRSKPKNGGASKRKASRRTVVDEDS 128
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 252 SNSVTKEISTQDIWKHLGSLYDFTMLDEAEP 344
SN V+K ++ +DI+ G YDF +P
Sbjct: 857 SNKVSKRLAAEDIYSANGGDYDFIFAASNDP 887
>SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 618
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 99 MVSSEEEPETKQDDAL-KWDVDMEIQLFYAMANHKPVGINK 218
M + + E K++DAL K DV+ E+ Y+MA+ + K
Sbjct: 567 MEDEQNQLEFKRNDALTKKDVEKEVHDSYSMADESQYNLEK 607
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 423 EVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRKESGSSH 599
E V + + K SP+P++TP+ +K + S R++ S+ K +K + H
Sbjct: 44 EDFVKQIEKQKLTGSPNPQATPKQENKSNFFSEKQS--VRENGNSSAGEKKQKWTSEQH 100
>SPAC17H9.05 |ebp2||rRNA processing protein Ebp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 333
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/59 (22%), Positives = 23/59 (38%)
Frame = +3
Query: 384 ENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISA 560
E++F + S + K P+PK ++ G + SK DS++A
Sbjct: 248 EDDFDIALSSASADTFKKGSRSTKSRPQPNPKRQKKNEKYGFGGPKHRSKSNDLDSLAA 306
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 25.8 bits (54), Expect = 5.0
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +3
Query: 111 EEEPETKQDDALKWDVDMEIQLFYAMANHKPVGINKHFQMACIWEKLSNSVTKEISTQDI 290
E E K++ + VD+ +QL + +H P+ + ++ + + + V E D+
Sbjct: 323 ELESNVKEEGTM---VDVWMQLCTYIDSHNPIQFHLPHSISSFFRGVGSGVMGEYIETDV 379
Query: 291 WKHLGS 308
KHL S
Sbjct: 380 LKHLKS 385
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 417 SKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSIS 557
S E VSEE D++ PSP +++K ++ KGT+K +++
Sbjct: 225 SSESEVSEEESDQEMSEPSPIEEDYNDTK---ARRITRKGTKKKTVT 268
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 25.4 bits (53), Expect = 6.5
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +3
Query: 405 MKQKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRKE 584
+K+ S++ ++ ++T +K +S S + +S ++S + M K +S SAL + E
Sbjct: 275 LKRASEDQIIPQQT-NKFHKSKSSTALFKSKKDSSSSLNKMHKS---ESHSALNNLHKSE 330
Query: 585 SGSS 596
SG+S
Sbjct: 331 SGTS 334
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 441 ETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRK 581
++ED++ +PS + T + + +K KG +KD L K RK
Sbjct: 388 DSEDEEYNNPSTQKTEKVSQSKKGAKVKEEKGLKKD--RKLPKKMRK 432
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 25.4 bits (53), Expect = 6.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 384 ENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNSK 503
ENEF A S L ++ T + + SP+P STP+ SK
Sbjct: 240 ENEFLASPMDPSLSKLFTKTT-NTEKISPTPFSTPKRKSK 278
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +3
Query: 384 ENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDS 551
ENE +K + KE + ++ S+ +KG+ SKD S+ K S
Sbjct: 208 ENETKDEIKSEKKEPEIKKQEGGSSTEKVGQPSSSDDKAKGSTSKDQPSEEEEKTS 263
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.0 bits (52), Expect = 8.7
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 417 SKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSIS 557
+K V V++ + D S SPK + S G++ D+MS+ +K S
Sbjct: 20 NKRVKVAKLPKKVD--SFSPKKKKNTTSSGSSESDSMSQNDKKKDSS 64
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 243 EKLSNSVTKEISTQDIWKHLGSLYDFTMLDEAEPIPFPNH 362
E L++S K ST+ +W + +++ T E P NH
Sbjct: 3943 ESLADSYLKLASTEPLWLFINNIHLSTPWAEKLPSKMSNH 3982
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,372,732
Number of Sequences: 5004
Number of extensions: 48773
Number of successful extensions: 165
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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