Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11h19f
(610 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0838 - 6360232-6360460,6360571-6360719,6360825-6360933,636... 34 0.077
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 32 0.41
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 31 0.54
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 31 0.94
12_02_0338 - 17712076-17712261,17712339-17712431,17712533-177125... 30 1.2
06_01_1173 + 10014391-10014678,10015478-10017245,10017333-100174... 30 1.2
05_03_0070 - 8023343-8023528,8023606-8023639,8024013-8024058,802... 30 1.2
03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397... 30 1.2
11_06_0710 - 26492093-26493460 29 2.2
07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616... 29 2.2
03_06_0036 + 31208993-31209391,31209616-31209693,31209881-312099... 29 2.9
02_04_0191 - 20783143-20784365,20784453-20784597,20784977-207853... 29 2.9
12_02_0240 - 16174724-16174927,16175005-16175097,16175199-161752... 29 3.8
09_04_0754 - 19946423-19947061,19947315-19947429,19947509-199475... 29 3.8
01_06_1745 - 39609894-39610030,39610127-39610223,39613856-396139... 29 3.8
09_06_0339 - 22400534-22400647,22401264-22401398,22401491-224015... 28 5.0
08_02_1576 + 27965862-27965864,27965952-27966026,27966113-279662... 28 5.0
03_01_0150 + 1191410-1191697,1191818-1191941,1192063-1192121,119... 28 5.0
03_01_0082 + 653041-653137,653219-653496,653596-653689,653804-65... 28 5.0
08_02_1347 - 26300295-26300483,26300598-26300657,26300850-263009... 28 6.7
07_03_0194 + 14979995-14980222 28 6.7
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 28 6.7
11_06_0080 - 19880319-19880957,19881800-19881948,19882266-198835... 27 8.8
10_02_0126 - 5543658-5543670,5543748-5543840,5544344-5544529,554... 27 8.8
05_03_0033 - 7585267-7586028 27 8.8
03_05_0738 + 27267514-27268279,27268373-27268395 27 8.8
02_04_0591 - 24159654-24160155,24160233-24160316,24160898-241609... 27 8.8
>06_01_0838 -
6360232-6360460,6360571-6360719,6360825-6360933,
6361446-6362276,6362865-6362969,6363084-6363180,
6363303-6363341,6363435-6363477
Length = 533
Score = 34.3 bits (75), Expect = 0.077
Identities = 28/110 (25%), Positives = 48/110 (43%)
Frame = +3
Query: 240 WEKLSNSVTKEISTQDIWKHLGSLYDFTMLDEAEPIPFPNHEITFCLPENEFGALMKQKS 419
W + K ++ QD + + D +L E +P + L +NE A
Sbjct: 66 WNVGGRTPNKRLNLQDFLQ-VEESPDIYVLGFQEIVPLTAGNV-LVLEDNEPAARWLALI 123
Query: 420 KEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALAT 569
+ L + E DG PSP + P S+S T+ N ++ R+D++S A+
Sbjct: 124 HQALNMPQ-EPADGDEPSPLTPPPSSSTTTSESSNGARTRRRDAVSRSAS 172
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 465 SPSPKSTPRSNSKGTASKDNMSKGTRKDSISAL 563
+PSP S+P ++S G+ ++D+ S +RK S L
Sbjct: 241 TPSPSSSPSNSSGGSTARDSSSPSSRKHKSSTL 273
>11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 435 SEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSIS 557
+EE K ++P P S P + G K SKG +K+ ++
Sbjct: 932 AEEQAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVN 972
>07_03_1575 - 27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 30.7 bits (66), Expect = 0.94
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Frame = +3
Query: 210 INKHFQMACIWEKLSNSVTKEISTQDI--WKHLGSLYDFTMLDEAEPIPFPNH-----EI 368
+++ F + + +K + + I+ +D W H G +Y T+ + I F H ++
Sbjct: 1334 LSEVFPVCRLCQKCYSGESIYIACEDCGDWFH-GDIYSITLENVNNLIGFKCHRCRLKDV 1392
Query: 369 TFCLPENEFGALMKQKSKEVLVSEETEDKDGRSPS 473
C LM Q K+ + S EDK+ RSP+
Sbjct: 1393 PVCPYVQTDNILMAQSDKDDVTSRSIEDKEDRSPT 1427
>12_02_0338 -
17712076-17712261,17712339-17712431,17712533-17712593,
17712681-17712791,17712872-17713123,17713207-17714543,
17714649-17715317,17715403-17715642
Length = 982
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +3
Query: 342 PIPFPNHEITFCLPENEFGALMKQKSKEV--LVSEETEDKDGRSPSPKSTPRSNSKGTAS 515
P+P EIT PE +F A + +EV L + TE + PSP P + S
Sbjct: 560 PVPDVPMEITVAEPEVQFVASVGSDKEEVPGLEWDGTEPEIFEDPSPAKDPEV-PRVLRS 618
Query: 516 KDNMSKGTRKDSISALATKTRKE 584
D+ SK K+ + KE
Sbjct: 619 HDSKSKDENKEKFMVTVFRGGKE 641
>06_01_1173 +
10014391-10014678,10015478-10017245,10017333-10017436,
10017632-10017706,10017887-10017918,10019396-10019482,
10020848-10021294,10021477-10021630,10022203-10022329,
10022547-10022632,10022719-10022790,10023083-10023286,
10023732-10024049
Length = 1253
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +3
Query: 243 EKLSNSVTKEISTQDIWKHLGSLYDFTMLDEAEPIPFPNHEITFCLPENEFGALMKQKSK 422
E L+ V + +D + S D + ++++P+ + +TF L + Q+ +
Sbjct: 540 ENLNGKVASSSNNEDAGQIFESSRDVSRPEKSKPVV--SCPLTFSLLSGQSMVTSSQQLR 597
Query: 423 EVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSIS---ALATKTRKESGS 593
S+ TE + PS +T S GTA ++ KG+R D + L ++T + GS
Sbjct: 598 PGW-SQSTEMVSSQEPS--ATAASIDIGTAGANDKVKGSRPDRLERKRKLGSETHDDKGS 654
Query: 594 SHA 602
+
Sbjct: 655 KRS 657
>05_03_0070 -
8023343-8023528,8023606-8023639,8024013-8024058,
8024139-8024389,8024473-8026001,8026128-8026496,
8026582-8026821
Length = 884
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +3
Query: 342 PIPFPNHEITFCLPENEFGALMKQKSKEV--LVSEETEDKDGRSPSPKSTPRSNSKGTAS 515
P+P EIT PE +F A + +EV L + TE + PSP P + S
Sbjct: 524 PVPDVPMEITVAEPEVQFVASVGSDKEEVPGLEWDGTEPEIFEDPSPAKDPEV-PRVLRS 582
Query: 516 KDNMSKGTRKDSISALATKTRKE 584
D+ SK K+ + KE
Sbjct: 583 HDSKSKDENKEKFMVTVFRGGKE 605
>03_05_0791 +
27736978-27737217,27737648-27739191,27739512-27739763,
27739844-27739954,27740042-27740102,27740373-27740558
Length = 797
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +3
Query: 342 PIPFPNHEITFCLPENEFGALMKQKSKEV--LVSEETEDKDGRSPSPKSTPRSNSKGTAS 515
P+P EIT PE +F A + +EV L + TE + PSP P + S
Sbjct: 485 PVPDVPMEITVAEPEVQFVASVGSDKEEVPGLEWDGTEPEIFEDPSPAKDPEV-PRVLRS 543
Query: 516 KDNMSKGTRKDSISALATKTRKE 584
D+ SK K+ + KE
Sbjct: 544 HDSKSKDENKEKFMVTVFRGGKE 566
>11_06_0710 - 26492093-26493460
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +3
Query: 408 KQKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRKES 587
K+KSK+ + + ++ D + KS+ N K SKG D K + +S
Sbjct: 174 KKKSKKKPKNPDDDEDDKKKSKKKSSDEDNDGAKKKKKKKSKGKSSDEEDDEKPKKKSKS 233
Query: 588 GSSHAST 608
S +S+
Sbjct: 234 KSKSSSS 240
>07_03_0697 +
20759176-20759817,20760592-20760708,20761422-20761696,
20761906-20762068,20762293-20762421,20762989-20763713,
20763853-20764081
Length = 759
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = +3
Query: 381 PENEFGALMKQKSKEVLVSEETEDKDGRSPSPKS-----TPRSNSKGTASKDNMSKGTRK 545
P N +K K+ EE + K G+ P + TPRS++KG+ K K
Sbjct: 4 PGNSDELASSKKVKKSNSKEERKHKKGKHERPAASDEAPTPRSDAKGSKGKKRKHKDGEG 63
Query: 546 DSISALATKTRKESGSS 596
+ +K RK G +
Sbjct: 64 EKEHGKRSKERKGEGEA 80
>03_06_0036 +
31208993-31209391,31209616-31209693,31209881-31209946,
31211556-31211621,31211815-31211865,31212635-31212928
Length = 317
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 399 ALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGT--RKDSISALATK 572
A++ QKS +E + S SP +T S+SK A K S+G RK + A AT
Sbjct: 96 AVVPQKSSPT--TECSSSVSSMSSSPTATAISSSKSPAFKKKGSRGCDQRKATAPAAATT 153
Query: 573 TRK 581
T K
Sbjct: 154 TNK 156
>02_04_0191 -
20783143-20784365,20784453-20784597,20784977-20785345,
20786164-20786250,20786405-20786603,20786733-20786818
Length = 702
Score = 29.1 bits (62), Expect = 2.9
Identities = 31/137 (22%), Positives = 46/137 (33%)
Frame = +3
Query: 198 KPVGINKHFQMACIWEKLSNSVTKEISTQDIWKHLGSLYDFTMLDEAEPIPFPNHEITFC 377
K VG K + + S +T Q +W+HL Y ++ EP P + +
Sbjct: 44 KQVGAGKGIDWRALVRRTSTGITSAREYQMLWRHLA--YGHEFVESVEPASLPLDDGSDL 101
Query: 378 LPENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSIS 557
E E ++ S G S S R NS+ A K R S
Sbjct: 102 ECEIEIVPAPGNEALAEATSFAKTIITGSSREQTSGQRVNSEAAALNTPNEKIVRVPSDK 161
Query: 558 ALATKTRKESGSSHAST 608
L R +G+ S+
Sbjct: 162 QLVPGHRLTNGTGPVSS 178
>12_02_0240 -
16174724-16174927,16175005-16175097,16175199-16175258,
16175708-16175789,16175873-16176075,16176222-16177226,
16177371-16177643
Length = 639
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 342 PIPFPNHEITFCLPENEFGALMKQKSKEV--LVSEETEDKDGRSPSPKSTP 488
P+P EIT PE +F A + + +EV L + TE K +PSP P
Sbjct: 340 PVPDVPMEITVAEPEVQFVASVGSELEEVPGLEWDSTEPKIFEAPSPVKDP 390
>09_04_0754 -
19946423-19947061,19947315-19947429,19947509-19947587,
19947863-19948007
Length = 325
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Frame = +3
Query: 312 YDFTMLDEAEPIPFPNHEI----TFCLPENEFGALMKQKSKEVLVSEETEDKDGRSPSPK 479
YD+ A P+ FP+ E+ + + + E L K+ + E R+ SP
Sbjct: 73 YDWLKTPPATPL-FPSLEMEANSSQMVFQRELPILQPVKTSRFSIKPEPTSTSTRTESPT 131
Query: 480 S------TPRSNSKGTASKDNMSKGTRKDSISALATKTRKESGSSH 599
S TP + S ++SK N +KG ++S + T + + SS+
Sbjct: 132 SSSSKSATPTARSSSSSSKKNFTKG--DPALSEVTTAYKMDKRSSY 175
>01_06_1745 -
39609894-39610030,39610127-39610223,39613856-39613996,
39614094-39614272,39615067-39615111,39615802-39615858,
39615935-39616163,39616348-39616418,39619527-39619635
Length = 354
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 438 EETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDS 551
EET K+G S K TP + + ++ +K T++++
Sbjct: 246 EETTAKEGESTDEKETPAKEGESSDEEETPAKNTKEEN 283
>09_06_0339 -
22400534-22400647,22401264-22401398,22401491-22401565,
22401646-22401648
Length = 108
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 453 KDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSIS 557
K ++P P S P + G K SKG +K+ ++
Sbjct: 4 KKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVN 38
>08_02_1576 +
27965862-27965864,27965952-27966026,27966113-27966247,
27967080-27967193
Length = 108
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 453 KDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSIS 557
K ++P P S P + G K SKG +K+ ++
Sbjct: 4 KKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVN 38
>03_01_0150 +
1191410-1191697,1191818-1191941,1192063-1192121,
1192565-1192629,1192838-1192931,1193005-1193085,
1193176-1193287,1193949-1194036,1194440-1194561,
1194636-1194973,1195579-1195870,1195946-1196016,
1197741-1197849,1198760-1198803,1198804-1198847,
1200431-1200524
Length = 674
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 417 SKEVLVSEETEDKDGRSPSPKSTPRSNSKGTA---SKDNMSKGTRKDSISALATKTRKES 587
S E+L S E KDG P S RS K +A +++++S+G S T ES
Sbjct: 365 STEILSSLEKSMKDGTGAKPASYDRSTVKRSAWNQNRNSVSRGVAIKSNGCTPLSTSHES 424
>03_01_0082 +
653041-653137,653219-653496,653596-653689,653804-653886,
654027-654247,654395-654533,654628-654710,654824-655036,
655099-655494,655587-655758,656085-656276,656363-656569,
656661-656753,656957-657156,657329-657838,658114-658184,
658322-658963,659057-659207,659425-659665
Length = 1360
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -1
Query: 298 CFHISW-VDISLVTEFDNFSHI-QAIWKCLFIPTGLWLAIA*NNCISISTSHFKASSC 131
C W +D L+ +F HI + IW+CL+ P+ L LA A + +I H SSC
Sbjct: 313 CSCCIWAMDGKLIKKFRE--HIGRGIWRCLYDPSTLLLATAGFDS-AIKVHHLYNSSC 367
>08_02_1347 -
26300295-26300483,26300598-26300657,26300850-26300933,
26301410-26301495,26302112-26302184,26302287-26302385,
26302526-26302639,26302751-26302807,26302908-26302994
Length = 282
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 499 LKGLLLKTICLKVLGRIASALLQRKHVKKAA 591
L L++ TI LGRI L+ RKH AA
Sbjct: 112 LSALVVMTILSTGLGRIVPNLISRKHTNSAA 142
>07_03_0194 + 14979995-14980222
Length = 75
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 237 IWEKLSNSVTKEISTQDIWKHLGSLYDFTMLDEAEPIPFPNH 362
+W K+S ++ + ++ H L D L EA +PFP +
Sbjct: 27 LWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEARRVPFPKY 68
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 414 KSKEVLVSEETEDKDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTRKE 584
+ K++ S T D+ +P + S GT+S DN + +++ S +A KE
Sbjct: 497 QKKDIAFSGATMDRSRTPDAPSTDTEHASNGTSSNDNGHAMSVENNASEVADTDNKE 553
>11_06_0080 -
19880319-19880957,19881800-19881948,19882266-19883589,
19883766-19883953,19884034-19884499
Length = 921
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 237 YRPFGS-VYLYQLVYGWP*RKIIVSP 163
YRP S YLYQ+ GWP K++ P
Sbjct: 338 YRPSRSNYYLYQVQAGWPSLKLLPHP 363
>10_02_0126 -
5543658-5543670,5543748-5543840,5544344-5544529,
5544613-5545310,5545323-5546237,5546842-5547081
Length = 714
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 342 PIPFPNHEITFCLPENEFGALMKQKSKEV--LVSEETEDKDGRSPSPKSTPRSNSKGTAS 515
P+P EIT PE +F A + + +EV L + TE + + PSP P
Sbjct: 414 PVPEVPMEITVAEPEVQFVASVGSEIEEVPGLEWDGTEPEIFKDPSPAKDPEVQETTVPE 473
Query: 516 KDNMS 530
K + S
Sbjct: 474 KASTS 478
>05_03_0033 - 7585267-7586028
Length = 253
Score = 27.5 bits (58), Expect = 8.8
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Frame = +3
Query: 336 AEPIPFPNHEITFCLPENEFGALMKQKSKEVLVSE---ETEDKDGRSPSPKSTPRSNSKG 506
AEP P E P E A K + K SE +TE K P PK+ P+S SK
Sbjct: 145 AEPKSEPKSEPQ-SEPNPETKAEPKSEPKSEPKSEPTPQTEPKAESQPEPKTEPKSESKA 203
Query: 507 TASKDNMSKGTRK 545
+ S K
Sbjct: 204 EPKPERKSYSKSK 216
>03_05_0738 + 27267514-27268279,27268373-27268395
Length = 262
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 381 PENEFGALMKQKSKEVLVSEETEDKDGRSPSPKSTPRSNSK 503
P + A K + + T + G+ P PK PR+ +K
Sbjct: 19 PRDHHHAAKKSPAPSATTTTATRQRHGQEPKPKPKPRARAK 59
>02_04_0591 -
24159654-24160155,24160233-24160316,24160898-24160944,
24161035-24161103,24161259-24161310,24161693-24161775,
24162312-24162422,24162808-24163211,24163308-24163380,
24163460-24163510,24163882-24164073,24164176-24164302,
24164753-24164934,24165023-24165226,24165738-24165836
Length = 759
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 453 KDGRSPSPKSTPRSNSKGTASKDNMSKGTRKDSISALATKTR 578
K+G + +PKS K S GT K +ISA ++K++
Sbjct: 584 KEGNAETPKSGGGDLPKKRGRPKGSSNGTPKSNISATSSKSK 625
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,504,056
Number of Sequences: 37544
Number of extensions: 283477
Number of successful extensions: 862
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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