Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11h16r
(757 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 48 1e-06
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 46 8e-06
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 45 1e-05
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 40 4e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 37 0.004
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 36 0.008
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 35 0.011
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 34 0.019
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 34 0.025
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 33 0.044
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 33 0.058
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 30 0.41
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.95
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 29 0.95
SPCC4G3.13c |||CUE domain protein Cue1/4 family|Schizosaccharomy... 27 2.9
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.9
SPAC4C5.01 |||haloacid dehalogenase-like hydrolase |Schizosaccha... 27 2.9
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 25 8.8
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 25 8.8
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 48.4 bits (110), Expect = 1e-06
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 748 LXSHMTTHAEDRXFICSTCGKRYKHRKQLTTHLRAHSDVRPYACETCNK 602
L SHM TH R F CS C K + + H + H+ ++ +AC TCN+
Sbjct: 587 LKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQ 635
Score = 37.1 bits (82), Expect = 0.003
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -1
Query: 709 FICST--CGKRYKHRKQLTTHLRAHSDVRPYACETCNKS 599
++C+ C KR+ L +H+ H++ RP+ C C KS
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKS 608
Score = 32.3 bits (70), Expect = 0.077
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 615 KLVTRASNLAVHIRSHTGEKPHACGVC 535
K TRA NL H+ +HT +P C +C
Sbjct: 579 KRFTRAYNLKSHMNTHTNYRPFQCSIC 605
Score = 31.5 bits (68), Expect = 0.13
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 447 KGFYDASALGRHRRTHTGELPYQCPGCARAFPDSWKRKTH 328
K F A L H THT P+QC C ++F ++ H
Sbjct: 579 KRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRH 618
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 45.6 bits (103), Expect = 8e-06
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -1
Query: 742 SHMTTHAEDRXFICSTCGKRYKHRKQLTTHLRAHSDVRPYACE 614
SH+ TH DR + C C + L HLR H + RPY CE
Sbjct: 462 SHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE 504
Score = 33.5 bits (73), Expect = 0.033
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 718 DRXFIC--STCGKRYKHRKQLTTHLRAHSDVRPYACETC 608
D ++C + C KR + + +H++ H RPY C+ C
Sbjct: 440 DGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLC 478
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 414 HRRTHTGELPYQCPGCARAFPDSWKRKTHLMRAH 313
H +TH + PY+C C F K HL R H
Sbjct: 463 HIQTHLSDRPYRCDLCKAGFVRHHDLKRHL-RIH 495
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 44.8 bits (101), Expect = 1e-05
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 748 LXSHMTTHAEDRXFIC--STCGKRYKHRKQLTTHLRAHSDVRPYAC 617
L H+ TH+ +R F+C + C K + + L H R H++V+P++C
Sbjct: 40 LEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSC 85
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 694 CGKRYKHRKQLTTHLRAHSDVRPYACE--TCNKS 599
CGK+Y L HLR HS+ RP+ C+ C+K+
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKA 63
Score = 36.7 bits (81), Expect = 0.004
Identities = 27/107 (25%), Positives = 36/107 (33%), Gaps = 6/107 (5%)
Frame = -2
Query: 615 KLVTRASNLAVHIRSHTGEKPHACGVCG----FXXXXXXXXXXXXXXXXXXXXXXXXXCG 448
K +R S L H+R+H+ E+P C G F C
Sbjct: 32 KKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCD 91
Query: 447 KGFYDASALGRHRRTHTGELPYQC--PGCARAFPDSWKRKTHLMRAH 313
FY L RH H PY C GC F + ++H+ H
Sbjct: 92 AQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACH 138
Score = 30.7 bits (66), Expect = 0.23
Identities = 27/108 (25%), Positives = 37/108 (34%), Gaps = 7/108 (6%)
Frame = -2
Query: 615 KLVTRASNLAVHIRSHTGEKPHACGVCGFXXXXXXXXXXXXXXXXXXXXXXXXXCGKGFY 436
K R S+L +H R HT KP +C G +G
Sbjct: 62 KAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCD 121
Query: 435 DASALGRHRRTH-----TGELPYQCP--GCARAFPDSWKRKTHLMRAH 313
+ + + R+H T LPY C C F K + H+ RAH
Sbjct: 122 ECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAH 169
Score = 30.7 bits (66), Expect = 0.23
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = -1
Query: 754 TQLXSHMTTHAEDRXFIC--STCGKRYKHRKQLTTHLRAHSDVRPYAC--ETCNK 602
+ L H H + F C C ++ ++ L H+ H +PYAC E C++
Sbjct: 68 SHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDE 122
Score = 29.9 bits (64), Expect = 0.41
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -2
Query: 447 KGFYDASALGRHRRTHTGELPYQC--PGCARAFPDSWKRKTHLMRAHR 310
K FY S L H+R HT P+ C GC F + H+ HR
Sbjct: 62 KAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHI-EVHR 108
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -2
Query: 447 KGFYDASALGRHRRT-HTGELPYQCPGCARAFPDSWKRKTHLMR 319
K F +SAL +H H G + + C C F + HL R
Sbjct: 245 KSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLER 288
Score = 25.4 bits (53), Expect = 8.8
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Frame = -1
Query: 703 CSTCGKRYKHRKQLTTHLRAH----SDVRPYAC--ETCNKS 599
CS CG+++K L H+ H + + Y C E C KS
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKS 246
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 748 LXSHMTT-HAEDRXFICSTCGKRYKHRKQLTTHL 650
L H++ H + F C +CG ++ ++ L HL
Sbjct: 253 LKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHL 286
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 39.9 bits (89), Expect = 4e-04
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 447 KGFYDASALGRHRRTHTGELPYQC--PGCARAFPDSWKRKTH 328
K FY RH RTHTGE P+ C PGCA+ F S + H
Sbjct: 33 KAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Score = 33.1 bits (72), Expect = 0.044
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 615 KLVTRASNLAVHIRSHTGEKPHAC 544
K R + HIR+HTGEKPH C
Sbjct: 33 KAFYRLEHQTRHIRTHTGEKPHVC 56
Score = 32.3 bits (70), Expect = 0.077
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -1
Query: 739 HMTTHAEDRXFICST--CGKRYKHRKQLTTHLRAHSD 635
H+ TH ++ +C+ C KR+ +LT H R H++
Sbjct: 44 HIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Score = 30.3 bits (65), Expect = 0.31
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 715 RXFICSTCGKRYKHRKQLTTHLRAHSDVRPYAC 617
R + C C K + + T H+R H+ +P+ C
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVC 56
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 36.7 bits (81), Expect = 0.004
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -1
Query: 715 RXFICSTCGKRYKHRKQLTTHLRAHSDVRPYACETC 608
R F C C KR+ + LT H HS P C C
Sbjct: 29 RVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYC 64
Score = 25.4 bits (53), Expect = 8.8
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = -2
Query: 447 KGFYDASALGRHRRTHTGELPYQCPGCARAFPDSWKRKTHLMRAH 313
K F L RH+ H+ P CP C K H+ R H
Sbjct: 38 KRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 35.5 bits (78), Expect = 0.008
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 715 RXFICSTCGKRYKHRKQLTTHLRA-HSDVRPYACETCNK 602
+ F+C C K++K + L H+R+ H+ +P+ C C K
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGK 458
Score = 33.9 bits (74), Expect = 0.025
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 727 HAEDRXFICSTCGKRYKHRKQLTTHLRAHSDVRP-YAC 617
H ++ F+C CGKR+ R L H R H + P AC
Sbjct: 446 HTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRLAC 482
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 35.1 bits (77), Expect = 0.011
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = -1
Query: 715 RXFICSTCGKRYKHRKQLTTHLRAHSDVRPYAC 617
+ ++C TC + + + L H+R+H++ +P+ C
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
Score = 31.9 bits (69), Expect = 0.10
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 648 EHTQMYVL-TLVKLVTRASNLAVHIRSHTGEKPHAC 544
+ + YV T + R +L HIRSHT EKP C
Sbjct: 65 QKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 34.3 bits (75), Expect = 0.019
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 718 DRXFICS--TCGKRYKHRKQLTTHLRAHSDVRPYACETCNKS 599
D F C+ C K + ++ L H R H +V+ ++C CN++
Sbjct: 23 DPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRA 64
Score = 32.3 bits (70), Expect = 0.077
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -2
Query: 447 KGFYDASALGRHRRTHTGELPYQCPGCARAFPDSWKRKTHLMRAH 313
K F L RH RTH + C C RAF S H+ + H
Sbjct: 35 KSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -1
Query: 748 LXSHMTTHAEDRXFICSTCGKRYKHRKQLTTHLR 647
L H TH + F CS C + + L H++
Sbjct: 43 LRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 33.9 bits (74), Expect = 0.025
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -2
Query: 447 KGFYDAS--ALGRHRRTHTGELPYQC--PGCARAFPDSWKRKTHLMRAH 313
KG S AL H R+HTGE P+ C P C R+F S H+ H
Sbjct: 83 KGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
Score = 32.3 bits (70), Expect = 0.077
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 591 LAVHIRSHTGEKPHACGV 538
L H+RSHTGEKP C V
Sbjct: 93 LVAHLRSHTGEKPFICSV 110
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 703 CSTCGKRYKHRKQLTTHLRAHSDVRPYACET--CNKS 599
C G R L HLR+H+ +P+ C C++S
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRS 116
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 33.1 bits (72), Expect = 0.044
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -2
Query: 447 KGFYDASALGRHRRTHTGELPYQC--PGCARAFPDSWKRKTHLMRAHRL 307
+GF S+L H +HTGE P+ C GC +AF + H R H L
Sbjct: 475 QGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRH-QRIHGL 522
Score = 32.3 bits (70), Expect = 0.077
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 606 TRASNLAVHIRSHTGEKPHACGVCG 532
+R S+L +H SHTGE+P C G
Sbjct: 478 SRPSSLKIHTYSHTGERPFVCDYAG 502
Score = 30.7 bits (66), Expect = 0.23
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -1
Query: 754 TQLXSHMTTHAEDRXFIC--STCGKRYKHRKQLTTHLRAH 641
+ L H +H +R F+C + CGK + R + H R H
Sbjct: 481 SSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 32.7 bits (71), Expect = 0.058
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 6/40 (15%)
Frame = -2
Query: 417 RHRRTHTGELPYQC--PGCARAFP--DSWKR--KTHLMRA 316
RH R+HTGE P++C P C + F D R +THL +A
Sbjct: 21 RHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKA 60
Score = 32.7 bits (71), Expect = 0.058
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -1
Query: 739 HMTTHAEDRXFICS--TCGKRYKHRKQLTTHLRAH 641
H+ +H ++ F CS +C KR+ R +L H+R H
Sbjct: 22 HIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 29.9 bits (64), Expect = 0.41
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2
Query: 582 HIRSHTGEKPHAC 544
HIRSHTGEKP C
Sbjct: 22 HIRSHTGEKPFEC 34
Score = 27.5 bits (58), Expect = 2.2
Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -1
Query: 715 RXFICSTCGKRYKHRKQLTTHLRAHSDVRPYACE--TCNK 602
+ + C C + + ++ H+R+H+ +P+ C +C K
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKK 41
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 29.9 bits (64), Expect = 0.41
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -2
Query: 447 KGFYDASALGRHRRTHTGELPYQCPGCARAFPDSWKRKTHLMRAH 313
K F RH R+HT + CP C+ +F S H+ + H
Sbjct: 26 KSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
Score = 27.5 bits (58), Expect = 2.2
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = -1
Query: 694 CGKRYKHRKQLTTHLRAHSDVRPYACETCNKS 599
C K + ++ H R+H++ + + C C+ S
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSS 55
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 0.95
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Frame = -3
Query: 536 AGSARPPAPRCGATRARTHEPARTSAHTAGRDSTTPAPWVDTVARTPGSSPTSARGAHEP 357
+ ++ PP P ++ + P +++ + ++ P T TP PTS P
Sbjct: 311 SSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTP 370
Query: 356 SP---TAGNGRLIS-CARTDSLCTT 294
P T+ G S T + CTT
Sbjct: 371 PPPASTSSTGTSSSPLLSTSTSCTT 395
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 28.7 bits (61), Expect = 0.95
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 739 HMTTHAEDRXFICSTCGKRYKHRKQLTTHLRAHSDVR 629
H E++ + C C KRYK+ L H R HS ++
Sbjct: 389 HQGFVVENKPYRCEVCSKRYKNLNGLKYH-RTHSHLQ 424
>SPCC4G3.13c |||CUE domain protein Cue1/4 family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 215
Score = 27.1 bits (57), Expect = 2.9
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = -1
Query: 475 PHAPLRTLREGILRRQRPGSTPSHAHRGAPLPVPGVRTSL----PRQLETEDSSHARAQT 308
PH + + + + +T +A RG PLP+P +SL P SSH+ T
Sbjct: 61 PHLESSAIAYDLQKTKNVDATIENALRGQPLPLPPRNSSLYARFPLSAGAGASSHSEETT 120
Query: 307 RSARHTAH 284
S T++
Sbjct: 121 PSHEVTSN 128
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 27.1 bits (57), Expect = 2.9
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 12/53 (22%)
Frame = -3
Query: 464 SAHTAGRDSTT--PAPWVDTVARTPGSSPTS----------ARGAHEPSPTAG 342
S H AG S T P+P T TPGS+ T A G +P+P AG
Sbjct: 554 SKHAAGSGSATTIPSPGSATTKPTPGSATTKPTPVSATEEHAAGTTKPAPAAG 606
>SPAC4C5.01 |||haloacid dehalogenase-like hydrolase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 246
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 399 TGELPYQCPGCARAFPDSWKRKTHLMRAHR 310
TG+ P PG + FPD W + +L+ R
Sbjct: 138 TGDNPSIAPGRGKPFPDIWLKVLNLINESR 167
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 25.4 bits (53), Expect = 8.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 241 CKVQILVEGPAISAHARYVVQSESVRAHEMSLPFPAVGEGSCAPRALVGELPGV 402
C + +V G A AH + + ++ + + FP V + A + G LPGV
Sbjct: 517 CILYQMVYGRAPFAHLKMIQAIAAIPNEQYHIHFPEVALPANAVQEKEGSLPGV 570
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1317
Score = 25.4 bits (53), Expect = 8.8
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -3
Query: 362 EPSPTAG--NGRLISCAR-TDSLCTTYRACAEMAGPSTNI 252
+PS TA G +++ R TD++ ++ACA G + N+
Sbjct: 1078 KPSETAAVVGGNVLTSQRITDTILKAFQACAASQGDTNNL 1117
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,968,999
Number of Sequences: 5004
Number of extensions: 59290
Number of successful extensions: 256
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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