Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11h16r
         (757 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    58   3e-10
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    33   0.010
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            28   0.36 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    27   0.62 
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   1.9  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         25   3.3  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   4.4  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   5.8  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   5.8  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   7.7  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   7.7  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 58.0 bits (134), Expect = 3e-10
 Identities = 34/96 (35%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = -2

Query: 597 SNLAVHIRSHTGEKPHACGVC-GFXXXXXXXXXXXXXXXXXXXXXXXXXCGKGFYDASAL 421
           ++L  H+ +HTG KPH C  C                            C     + S L
Sbjct: 168 ASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKL 227

Query: 420 GRHRRTHTGELPYQCPGCARAFPDSWKRKTHLMRAH 313
            RH RTHTGE P+QCP C  A PD +K   H MR H
Sbjct: 228 KRHIRTHTGEKPFQCPHCTYASPDKFKLTRH-MRIH 262



 Score = 47.6 bits (108), Expect = 4e-07
 Identities = 31/96 (32%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
 Frame = -2

Query: 606 TRASNLAVHIR-SHTGEKPHACGVCGFXXXXXXXXXXXXXXXXXXXXXXXXXCGKGFYDA 430
           T +  L  HIR  HT E+PH C  C +                         C     D 
Sbjct: 193 TTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDK 252

Query: 429 SALGRHRRTHTGELPYQCPGCARAFPDSWKRKTHLM 322
             L RH R HTGE PY C  C   F  S   K H M
Sbjct: 253 FKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKM 288



 Score = 45.2 bits (102), Expect = 2e-06
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = -1

Query: 757 ITQLXSHMTTHAEDRXFICSTCGKRYKHRKQLTTHLRAHSDVRPYACETC 608
           +++L  H+ TH  ++ F C  C      + +LT H+R H+  +PY+C+ C
Sbjct: 224 LSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVC 273



 Score = 44.8 bits (101), Expect = 3e-06
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -1

Query: 748 LXSHMTTHAEDRXFICSTCGKRYKHRKQLTTHLRAHSDVRPYACETCN 605
           L  H+ TH+EDR   C  C + +K    L  H+  H+  +P+ C+ C+
Sbjct: 142 LSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCD 189



 Score = 38.3 bits (85), Expect = 3e-04
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 739 HMTTHAEDRXFICSTCGKRYKHRKQLTTHLRAHSDVRPYACETC 608
           H  TH  ++ + C  C       + L +HL  H+D +PY C+ C
Sbjct: 345 HAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQC 388



 Score = 37.1 bits (82), Expect = 6e-04
 Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
 Frame = -2

Query: 591 LAVHIRSHTGEKPHACGVCGFXXXXXXXXXXXXXXXXXXXXXXXXXCGKGFYDASALGRH 412
           L+ H+++H+ ++PH C VC                           C   F  +  L RH
Sbjct: 142 LSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRH 201

Query: 411 -RRTHTGELPYQCPGCARAFPDSWKRKTHLMRAH 313
            R  HT E P++C  C  A  +  K K H+ R H
Sbjct: 202 IRYRHTHERPHKCTECDYASVELSKLKRHI-RTH 234



 Score = 34.3 bits (75), Expect = 0.004
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = -1

Query: 754 TQLXSHMTTHAEDRXFICSTCGKRYKHRKQLTTHLRAHSDVRPYACETCNK 602
           TQ     T  +    ++C+ C         L+ HL+ HS+ RP+ C  C +
Sbjct: 112 TQTRGKRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCER 162



 Score = 34.3 bits (75), Expect = 0.004
 Identities = 23/98 (23%), Positives = 34/98 (34%), Gaps = 1/98 (1%)
 Frame = -2

Query: 603 RASNLAVHIRS-HTGEKPHACGVCGFXXXXXXXXXXXXXXXXXXXXXXXXXCGKGFYDAS 427
           R ++L +H+++ HT +KP  C  C                           C        
Sbjct: 309 RKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMR 368

Query: 426 ALGRHRRTHTGELPYQCPGCARAFPDSWKRKTHLMRAH 313
            L  H   HT + PY+C  CA+ F      K H+   H
Sbjct: 369 HLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYH 406



 Score = 33.9 bits (74), Expect = 0.005
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 757 ITQLXSHMTTHAEDRXFICSTCGKRYKHRKQLTTHLR-AHSDVRPYACETCN 605
           +  L +H+ TH   +   C  C   +    +L  H+R  H+  RP+ C  C+
Sbjct: 167 LASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECD 218



 Score = 32.3 bits (70), Expect = 0.017
 Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = -1

Query: 754 TQLXSHMTT-HAEDRXFICSTCGKRYKHRKQLTTHLRAHSDVRPYACETC 608
           T L  H+   H  D+   C  C   +  R     H + H   + Y CE C
Sbjct: 311 TDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYC 360



 Score = 31.5 bits (68), Expect = 0.029
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 727 HAEDRXFICSTCGKRYKHRKQLTTHLRAHSDVRPYACETC 608
           H  +R   C+ C        +L  H+R H+  +P+ C  C
Sbjct: 206 HTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHC 245



 Score = 26.2 bits (55), Expect = 1.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 706 ICSTCGKRYKHRKQLTTHLRAH 641
           IC TC + ++H+  L  H+  H
Sbjct: 421 ICPTCKRPFRHKGNLIRHMAMH 442


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 33.1 bits (72), Expect = 0.010
 Identities = 17/64 (26%), Positives = 30/64 (46%)
 Frame = -1

Query: 472 HAPLRTLREGILRRQRPGSTPSHAHRGAPLPVPGVRTSLPRQLETEDSSHARAQTRSARH 293
           H   R L   +L  +  G  PS + R  P P+P   ++ P+Q + +   + + Q +    
Sbjct: 153 HQRDRNLLNSLLAAKVAGGQPSASSRQPPTPLPRRSSAQPQQQQQQQQRNQQEQEQPRAS 212

Query: 292 TAHA 281
           T+HA
Sbjct: 213 TSHA 216


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 418  STPSHAHRGAPLPVPGVRTSL-PRQLETEDSSHARAQTRSARHTAHAQRWQDPQ 260
            ST  HA +  PLP+PG+ + + P+QL        + Q +  +     Q+ Q  Q
Sbjct: 1272 STDYHATQ-QPLPLPGLASEMQPQQLHRSQQQQQQQQQQQQQQQQQQQQQQQQQ 1324


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = -1

Query: 472 HAPLRTLREGILRRQRPGSTPSHAHRGAPLPVPGVRTSLPRQLETEDSSHARAQTRSARH 293
           H   R +   +L  +  G  PS + R  P P+P   ++ P+Q + +   +   Q +    
Sbjct: 177 HQRDRDVLNSLLAAKVGGGQPSASPRQPPTPLPRRSSAQPQQQQQQQQRNQHEQEQPRAS 236

Query: 292 TAHA 281
           T+ A
Sbjct: 237 TSRA 240


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 11/62 (17%)
 Frame = -3

Query: 530 SARPPAPRCGATRARTHEPARTSAH-----TAGRDSTTPAP------WVDTVARTPGSSP 384
           S +PP P    T   T   A T+ H     T   D   P P      W+D  A T   +P
Sbjct: 175 SDQPPPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHAP 234

Query: 383 TS 378
           T+
Sbjct: 235 TT 236


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -3

Query: 497 TRARTHEPARTSAHTAGRDSTTPAPWVDTVARTPGSSPTSA 375
           T+A     + T+  T    +TTP P   T+    G  PT A
Sbjct: 117 TKATVAPKSTTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCA 157


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = -3

Query: 488  RTHEPARTSAHTAGRDSTTPAPWVDTVARTPGSSPTSARGAHEPSPTA 345
            R ++P R       R S+   P   +V+ T GSS T    A   S  A
Sbjct: 1849 RLYQPVRLCGPCYQRISSMTVPATSSVSTTGGSSSTMVSSAVSNSAVA 1896


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = -3

Query: 488  RTHEPARTSAHTAGRDSTTPAPWVDTVARTPGSSPTSARGAHEPSPTA 345
            R ++P R       R S+   P   +V+ T GSS T    A   S  A
Sbjct: 1850 RLYQPVRLCGPCYQRISSMTVPATSSVSTTGGSSSTMVSSAVSNSVVA 1897


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 5   ILMCFY*YCLTRFIQWNVHSLLLLKI 82
           + MC + Y     +Q N+H+L +L++
Sbjct: 112 VQMCLHLYLSPDVVQANIHNLCVLRV 137


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 527 ARPPAPRCGATRARTH 480
           A+P   RC AT AR+H
Sbjct: 843 AKPHRSRCEATEARSH 858


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -3

Query: 386 PTSARGAHEPSPTAGNGRLISCARTDSL 303
           P   RG   PS T+G    I   + DSL
Sbjct: 830 PEGNRGPSSPSSTSGAASPIQTVKNDSL 857


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 801,690
Number of Sequences: 2352
Number of extensions: 16758
Number of successful extensions: 93
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)