Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11h16f
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   0.85 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   0.85 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   1.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   2.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.6  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +1

Query: 466 ISSTIENYSDIILNALDYVHLNESEPEKVPEQNVLNNHQER 588
           +S  + ++  +++NALD++ LN+   +   +   +N H  R
Sbjct: 183 VSYNLFSFVPLVVNALDHLFLNDILSDICDKFEQINQHFRR 223


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +1

Query: 466 ISSTIENYSDIILNALDYVHLNESEPEKVPEQNVLNNHQER 588
           +S  + ++  +++NALD++ LN+   +   +   +N H  R
Sbjct: 139 VSYNLFSFVPLVVNALDHLFLNDILSDICDKFEQINQHFRR 179


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 534 FIKMYVVKSIQNYVT 490
           F+K Y+V   +NYVT
Sbjct: 37  FVKTYLVSDFENYVT 51


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 523 HLNESEPEKVPEQNVLNNHQERVCE 597
           H N +EP +   +N+L  H E V +
Sbjct: 100 HQNYNEPYQRTHENMLLRHHEEVAD 124


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 523 HLNESEPEKVPEQNVLNNHQERVCE 597
           H N +EP +   +N+L  H E V +
Sbjct: 100 HQNYNEPYQRTHENMLLRHHEEVAD 124


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 523 HLNESEPEKVPEQNVLNNHQERVCE 597
           H N +EP +   +N+L  H E V +
Sbjct: 100 HQNYNEPYQRTHENMLLRHHEEVAD 124


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = -3

Query: 318 FYFNSAIVTELLW*GVSIKYFYISTKTKHFHSFW 217
           FY + + ++ L++ G  + YF  +      ++FW
Sbjct: 42  FYQDESPISRLVYIGTDLSYFISNVYQILAYNFW 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,117
Number of Sequences: 336
Number of extensions: 2505
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)