Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11h14f
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12193| Best HMM Match : No HMM Matches (HMM E-Value=.) 168 3e-42
SB_27337| Best HMM Match : efhand (HMM E-Value=2.9e-21) 127 6e-30
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 55 4e-08
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 52 4e-07
SB_18942| Best HMM Match : efhand (HMM E-Value=1.7e-30) 49 2e-06
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_37032| Best HMM Match : efhand (HMM E-Value=4.7e-35) 47 1e-05
SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31) 46 2e-05
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 45 4e-05
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 45 4e-05
SB_27027| Best HMM Match : efhand (HMM E-Value=8.7e-08) 45 5e-05
SB_2973| Best HMM Match : efhand (HMM E-Value=2e-09) 43 2e-04
SB_693| Best HMM Match : efhand (HMM E-Value=2e-09) 43 2e-04
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11) 42 5e-04
SB_34345| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 40 0.002
SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11) 39 0.003
SB_43892| Best HMM Match : efhand (HMM E-Value=2.3e-11) 39 0.003
SB_26865| Best HMM Match : efhand (HMM E-Value=7.5e-08) 39 0.003
SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08) 38 0.008
SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24) 38 0.008
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26) 37 0.014
SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26) 36 0.033
SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25) 35 0.043
SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25) 35 0.043
SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_59144| Best HMM Match : efhand (HMM E-Value=0.093) 34 0.076
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 34 0.076
SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22) 34 0.076
SB_8159| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 33 0.13
SB_34261| Best HMM Match : efhand (HMM E-Value=5.3e-14) 33 0.23
SB_38608| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 33 0.23
SB_17840| Best HMM Match : efhand (HMM E-Value=6.3e-18) 33 0.23
SB_11953| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_22463| Best HMM Match : VWA (HMM E-Value=0) 32 0.40
SB_11457| Best HMM Match : efhand (HMM E-Value=0.0066) 32 0.40
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 32 0.40
SB_53403| Best HMM Match : efhand (HMM E-Value=2.8e-12) 31 0.53
SB_31141| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_11877| Best HMM Match : efhand (HMM E-Value=7.8e-07) 31 0.53
SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23) 31 0.71
SB_13209| Best HMM Match : LRR_1 (HMM E-Value=1.7e-13) 31 0.93
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 30 1.2
SB_42267| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=5.9e-12) 29 2.2
SB_31565| Best HMM Match : efhand (HMM E-Value=3.4e-06) 29 2.2
SB_39288| Best HMM Match : efhand (HMM E-Value=0.00063) 29 2.9
SB_49265| Best HMM Match : efhand (HMM E-Value=0.68) 29 2.9
SB_27812| Best HMM Match : efhand (HMM E-Value=1.7e-07) 29 2.9
SB_53082| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 29 3.8
SB_58620| Best HMM Match : XH (HMM E-Value=1.6) 29 3.8
SB_3224| Best HMM Match : efhand (HMM E-Value=0.00096) 29 3.8
SB_50259| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_43413| Best HMM Match : Extensin_2 (HMM E-Value=4.3) 28 5.0
SB_30172| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21) 28 5.0
SB_59345| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_39231| Best HMM Match : zf-C2H2 (HMM E-Value=3.4e-31) 28 6.6
SB_44454| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40) 27 8.7
SB_45930| Best HMM Match : efhand (HMM E-Value=4.5e-09) 27 8.7
SB_28886| Best HMM Match : efhand (HMM E-Value=4.5e-09) 27 8.7
SB_23016| Best HMM Match : efhand (HMM E-Value=3e-12) 27 8.7
SB_12096| Best HMM Match : ig (HMM E-Value=9.4e-33) 27 8.7
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_12193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 168 bits (409), Expect = 3e-42
Identities = 76/142 (53%), Positives = 106/142 (74%)
Frame = +3
Query: 168 MSAGSVQEEELMQKSARAMTQATDPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLN 347
M+A + E+EL++K + Q DP+E LRL CLSRG+SGI GLGR F+ MDDDG++ L+
Sbjct: 1 MAATARHEKELIEKCKKNAGQTKDPVESLRLACLSRGSSGIKGLGRTFKIMDDDGNRSLD 60
Query: 348 KEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAF 527
EF G+++ G+ L E + F FDTD SG+I DEFLI++RPPMS++R+N+++QAF
Sbjct: 61 FNEFKKGLRDYGVMLEPKEVKRTFEAFDTDGSGTIDFDEFLIRLRPPMSKARKNVIQQAF 120
Query: 528 KKLDKTGDGAITIDDIKGVYSV 593
KLDKTGD IT++D+KGVY+V
Sbjct: 121 NKLDKTGDNNITVEDLKGVYNV 142
>SB_27337| Best HMM Match : efhand (HMM E-Value=2.9e-21)
Length = 172
Score = 127 bits (307), Expect = 6e-30
Identities = 62/134 (46%), Positives = 85/134 (63%)
Frame = +3
Query: 189 EEELMQKSARAMTQATDPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYG 368
E EL K+ + A P+EKL RG GI GR FR DDDG++ LN +EF G
Sbjct: 4 ERELKIKAKKMEENAKTPIEKLHAAMAGRGTCGIKMFGRAFRIFDDDGNRALNIDEFRKG 63
Query: 369 IKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTG 548
+++ G +L E ++LF+QFD D SGS+ +EFL +RP MS++R I+ +AF K+D TG
Sbjct: 64 MQDFGTKLTDDEVKQLFAQFDKDGSGSLDFEEFLRAVRPSMSKNRVEIIMKAFHKMDTTG 123
Query: 549 DGAITIDDIKGVYS 590
DG ITI D+K VY+
Sbjct: 124 DGVITIADLKKVYN 137
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 55.2 bits (127), Expect = 4e-08
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Frame = +3
Query: 186 QEEELMQKSARAMTQATDPLEKLRLLCLSR-----GASGILGLGRIFRRMDDDGSKLLNK 350
Q ++ QK PL K +LL +S + L F D DG ++
Sbjct: 250 QTQKNNQKYRNFRLNGRKPLSKNQLLEISSVREKLSEEQVAELKEAFALFDKDGGGSISS 309
Query: 351 EEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSES-RRNIVEQAF 527
E + ++ G + E +++ ++ D D +G I EFL + + E+ ++ AF
Sbjct: 310 SELAHVMRSLGQNPTEQELKDMIAEVDQDDNGEIDFPEFLQMVAKKIKETDTEEEIQDAF 369
Query: 528 KKLDKTGDGAITIDDIKGVYS 590
K DK GDG I+ ++K V S
Sbjct: 370 KVFDKNGDGMISSSELKLVMS 390
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPP 488
F D DGS ++ EE +K G + E +++ + D D +G + +EFL ++
Sbjct: 6 FSLFDKDGSGTISNEELEVVMKSLGQNPSDEELQQMIQEVDADGNGEVDFEEFLAMMKKQ 65
Query: 489 MSESRRNI-VEQAFKKLDKTGDGAITIDDIKGV 584
M + +AF+ D+ GDG+I+ +++ V
Sbjct: 66 MQHRDAEAEMREAFRVFDRNGDGSISEWELRSV 98
>SB_18942| Best HMM Match : efhand (HMM E-Value=1.7e-30)
Length = 233
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +3
Query: 288 ILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEF 467
I L +F D D S ++ E ++ G +++K + + D D SG I DEF
Sbjct: 89 IRDLKLVFDTFDTDKSGSIDGRELRKAMRTLGFKISKEGIAGMIADLDADQSGRIEFDEF 148
Query: 468 LIKIRPPMSESR--RNIVEQAFKKLDKTGDGAITIDDIKGV 584
L I S+ R + + Q FK D G IT++++K V
Sbjct: 149 LDFIISKQSDGRDVHDEIVQGFKMFDTDQSGRITLENLKQV 189
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL-IKIRP 485
F D +G ++ EE ++ GL E + + Q D D SG I L EF+ +
Sbjct: 21 FMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQADKDGSGDIDLPEFIELMASK 80
Query: 486 PMSESRRNIVEQAFKKLDKTGDGAITIDDIKGVYS 590
+++ + + +AF DK G+G I+ ++K V++
Sbjct: 81 SKNDTTESDLREAFSLFDKDGNGLISAQEMKFVFT 115
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL-IKIRP 485
F D + ++ EE + GL E + + Q D D SG I L EF+ +
Sbjct: 150 FMSFDKNVDGRIDAEELEIVTRSIGLHPKDEELKAMIKQADKDGSGDIDLPEFIELMASK 209
Query: 486 PMSESRRNIVEQAFKKLDKTGDGAITIDDIKGV 584
+++ + + +AF DK G+G I+ ++K V
Sbjct: 210 SKNDTTESDLREAFSLFDKDGNGLISAQEMKFV 242
>SB_37032| Best HMM Match : efhand (HMM E-Value=4.7e-35)
Length = 552
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +3
Query: 303 RIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL 470
R FR +D DGS L N +F +K ++LN+ E ++S +D D +G IS +EFL
Sbjct: 492 RAFRAIDKDGSGLCNPLDFRQMLKRFKIDLNEEEFFHVYSFYDKDMTGKISYNEFL 547
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPP 488
F D GS L++KE+ I + + + L +Q D +G +S ++FL
Sbjct: 179 FSAFDSSGSGLVSKEDLHQIINAFCFIMTDKQFQVLLNQLCVDRNGLLSYEDFLQSFNKS 238
Query: 489 MSESRRNIVEQ 521
+E+ + +E+
Sbjct: 239 DNEASQKWLER 249
>SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31)
Length = 156
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRP 485
+F + D DGS L K E + +K L L+ +AE D D SGS+S DEF I
Sbjct: 19 LFTKYDKDGSGRLQKTEMMELLK-VDLGLDDKQAETFLLLVDKDGSGSVSFDEFYTWIHD 77
Query: 486 PMS------ESRRNIVEQA---FKKLDKTGDGAITIDDIK 578
+ +SR + + +A FKK DK G+I ++ K
Sbjct: 78 KNTLQNIDDKSRYHKIRKAIEMFKKYDKDASGSIDREEFK 117
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Frame = +3
Query: 99 CFNYENSPKVKAEMESSVAWHRPMSAGSVQEEELMQKSARAMTQATDPLEKLRLLCLSRG 278
C +Y + K ++S + +G +Q+ E+M+ + D + LL + +
Sbjct: 3 CKSYFSEKTPKIVVKSLFTKYDKDGSGRLQKTEMMEL-LKVDLGLDDKQAETFLLLVDKD 61
Query: 279 ASGILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISL 458
SG + + + D + L I + +A E+F ++D D+SGSI
Sbjct: 62 GSGSVSFDEFYTWIHDKNT--------LQNIDDKSRYHKIRKAIEMFKKYDKDASGSIDR 113
Query: 459 DEFLIKIRPPMSESRRNI-VEQAFKKLDKTGDGAITIDD 572
+EF + M E+ + +++A KKLDK G+G I+ +
Sbjct: 114 EEF----KQLMHETGNKVNIDKALKKLDKDGNGQISFTE 148
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL 470
+F++ D D S +++EEF + ETG NK ++ + D D +G IS EFL
Sbjct: 99 MFKKYDKDASGSIDREEFKQLMHETG---NKVNIDKALKKLDKDGNGQISFTEFL 150
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPP 488
F D DG + +E ++ G ++E +++ ++ D D +G+I EFL +
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
Query: 489 MSES-RRNIVEQAFKKLDKTGDGAITIDDIKGV 584
M ++ + +AF+ DK G+G I+ +++ V
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHV 109
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPP 488
F D DG + +E ++ G ++E +++ ++ D D +G+I EFL +
Sbjct: 6 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 65
Query: 489 MSES-RRNIVEQAFKKLDKTGDGAITIDDIKGV 584
M + + +AF+ DK G+G I+ +++ V
Sbjct: 66 MKNTDSEEEIREAFRVFDKDGNGFISAAELRHV 98
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPP 488
F D DG + +E ++ G ++E +++ ++ D D +G+I EFL +
Sbjct: 6 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 65
Query: 489 MSES-RRNIVEQAFKKLDKTGDGAITIDDIKGV 584
M + + +AF+ DK G+G I+ +++ V
Sbjct: 66 MKNTDSEEEIREAFRVFDKDGNGFISAAELRHV 98
>SB_27027| Best HMM Match : efhand (HMM E-Value=8.7e-08)
Length = 103
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +3
Query: 315 RMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPM 491
+ D DGS ++ EE Y + +G +L++ EA EL FD + G +S +EF+ I+ M
Sbjct: 2 KFDRDGSGYISPEELRYVVCHSGEKLSEDEARELIDMFDKNKDGQLSWEEFVEFIKTSM 60
>SB_2973| Best HMM Match : efhand (HMM E-Value=2e-09)
Length = 508
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL 470
+FRR+D D S ++ EF+ G++++ + L E E++ D D G I EF+
Sbjct: 431 LFRRLDKDQSMQVSVREFVEGLRKSDVGLTAFEVEKIIESLDVDDDGEIDYSEFV 485
>SB_693| Best HMM Match : efhand (HMM E-Value=2e-09)
Length = 500
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL 470
+FRR+D D S ++ EF+ G++++ + L E E++ D D G I EF+
Sbjct: 423 LFRRLDKDQSMQVSVREFVEGLRKSDVGLTAFEVEKIIESLDVDDDGEIDYSEFV 477
>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 273 RGASGIL-GLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGS 449
RGA + L + FR D +G ++ EE + G L + EAEEL D D G
Sbjct: 210 RGAEKLEENLRQAFRVFDRNGDGYISAEELRVAVTTLGDALTQDEAEELIGMLDQDGDGK 269
Query: 450 ISLDEFLIKIRPPMSE 497
+ +EF++ + + E
Sbjct: 270 LGYEEFVVIAKKSLKE 285
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +3
Query: 315 RMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIK---IRP 485
R + DG+ ++ EF ++ G S+ ++ + FD + G+I DEF+ R
Sbjct: 152 RRNKDGT--IDHTEFGRVLQAIGYTPTISQILDILNAFDKNGDGAIDFDEFVTMSRYFRG 209
Query: 486 PMSESRRNIVEQAFKKLDKTGDGAITIDDIK 578
+E + QAF+ D+ GDG I+ ++++
Sbjct: 210 RGAEKLEENLRQAFRVFDRNGDGYISAEELR 240
>SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11)
Length = 497
Score = 41.5 bits (93), Expect = 5e-04
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Frame = +3
Query: 291 LGLGRIFRR--MDDD--GSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISL 458
LG+ RR MDDD K+ +K + L +KE +E + A +LF+ D D S S+S
Sbjct: 395 LGVSPTDRREAMDDDDKNGKMKSKNQLLTILKEYLIE-KRLRAVDLFNCLDKDKSRSVSP 453
Query: 459 DEF---LIKIRPPMSESRRNIVEQAFKKLDKTGDGAITIDDIKGV 584
+E L + R P+++S+ +++ LDK GDG I + V
Sbjct: 454 EELIEGLKRARIPLTDSQ---LKRLITLLDKDGDGMIDYSEFAAV 495
>SB_34345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +3
Query: 291 LGLGRIFRRMDDD--GSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDE 464
L L +F+ + ++ GS ++ KE+F+ G+++ L + + + LF D D SG ++ E
Sbjct: 386 LRLHDLFKMLSNNYSGSVVMKKEDFVAGMRKLKLPMGEQQLAALFDTIDDDGSGGLTYQE 445
Query: 465 FLIKIRPPMSESRRNI 512
F+ + S +R+ +
Sbjct: 446 FINMKKRRQSRTRKGL 461
>SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSI 452
F + D D S +++EEF G+KETGL + K + + L D ++ G I
Sbjct: 561 FNQFDKDHSGGISREEFSKGLKETGLVMTKRQLDRLMEYIDINNDGEI 608
Score = 34.3 bits (75), Expect = 0.076
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 393 NKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAITIDD 572
N+ + F+QFD D SG IS +EF ++ + +++ + +D DG I D
Sbjct: 553 NRLRLIDWFNQFDKDHSGGISREEFSKGLKETGLVMTKRQLDRLMEYIDINNDGEIEYRD 612
Query: 573 IK 578
+K
Sbjct: 613 LK 614
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 369 IKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRN-IVEQAFKKLDKT 545
++ G ++E +++ ++ D D +G I EFL + M E + + +AF+ DK
Sbjct: 1 MRSLGQNPTEAELQDMINEVDADGNGIIDFPEFLTMMAKKMGEQDSDEEIREAFRVFDKD 60
Query: 546 GDGAITIDDIKGV 584
G+G I+ +++ V
Sbjct: 61 GNGFISAAELRHV 73
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLD 461
FR D DG+ ++ E + + G +L E EE+ + D D G ++ +
Sbjct: 54 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVEEMIMEADIDGDGQVNYE 104
>SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11)
Length = 1771
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLI 473
+FR +D LN +F + + +L+KSE +F D D SGSI DEF +
Sbjct: 1393 LFRLLDVHDEMALNDIQF-WSFMRSATDLSKSEIYTVFDMLDVDCSGSIDFDEFYL 1447
>SB_43892| Best HMM Match : efhand (HMM E-Value=2.3e-11)
Length = 353
Score = 39.1 bits (87), Expect = 0.003
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Frame = +3
Query: 96 PCFNYENSPKVKAE---MESSVAWHRPMSAGSVQEEELMQKSARAMTQATDPLEKLRLLC 266
PC N K+ A M+ S A PM+ + ++ LM ++ A+ L + + L
Sbjct: 207 PCTEEINDAKLFARNVRMQMSSALGVPMTEHTFEDTRLMLEATHKKLPASTGLVEYQKLS 266
Query: 267 --LSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDS 440
LS + L F ++D + L++ +EF + L + +E EELF+ +D D
Sbjct: 267 SKLSVRVDSMKQLLHRFAKIDTNADGLVDIQEFAAFLN---LPIT-AEVEELFNLYDRDE 322
Query: 441 SGSISLDEFLI 473
SG I E+LI
Sbjct: 323 SGFIDFREYLI 333
>SB_26865| Best HMM Match : efhand (HMM E-Value=7.5e-08)
Length = 151
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLI 473
+FR +D LN +F + + +L+KSE +F D D SGSI DEF +
Sbjct: 10 LFRLLDVHDEMALNDIQF-WSFMRSATDLSKSEIYTVFDMLDVDCSGSIDFDEFYL 64
>SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1580
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLY-GIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLI---- 473
+++ D + ++ EFLY E E K AE++ FD + ++ DEFL
Sbjct: 1425 WKKADVNQDGKIDVTEFLYFQHPEYNPETIKKMAEDMLVNFDRNGDKIMTGDEFLALPPG 1484
Query: 474 KIRPPMSESRRNIVE---QAFKKLDKTGDGAITIDDI 575
++ P + + + E + FK +DK GDG + +D++
Sbjct: 1485 EVDPDQAAAEKEYKEDRKREFKLMDKNGDGVVKLDEL 1521
>SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08)
Length = 676
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEF 467
+F + D D S + ++EF G+K G+ ++ + L D D G I EF
Sbjct: 610 LFNQFDKDNSLSVTRDEFYTGLKGIGVPMSDKDLTMLIDLLDEDGDGEIDFSEF 663
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +3
Query: 411 ELFSQFDTDSSGSISLDEF---LIKIRPPMSESRRNIVEQAFKKLDKTGDGAITIDD 572
+LF+QFD D+S S++ DEF L I PMS+ ++ LD+ GDG I +
Sbjct: 609 DLFNQFDKDNSLSVTRDEFYTGLKGIGVPMSDKDLTML---IDLLDEDGDGEIDFSE 662
>SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24)
Length = 176
Score = 37.5 bits (83), Expect = 0.008
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +3
Query: 279 ASGILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISL 458
A I LG+ FR++D D S L+ EEF+ + E L+ N + + + FD D +G +
Sbjct: 38 ADEIRRLGKRFRKLDLDNSGSLSVEEFM-SLPE--LQQNPL-VQRVITIFDADGNGEVDF 93
Query: 459 DEFLIKIRP-PMSESRRNIVEQAFKKLDKTGDGAIT 563
EF+ + + + + ++ AF+ D DG I+
Sbjct: 94 KEFIEGVSQFSVKGDKESKLKFAFRIYDMDNDGYIS 129
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRP 485
IFRRMD D L +E+F+ G+ T + E E + S+F + +G I EF+ ++
Sbjct: 6040 IFRRMDHDRDGKLTREQFITGVLNTSFPTERWEMEIVASKF--ERNGLIDYKEFMNALKD 6097
Query: 486 PMSESR 503
S +
Sbjct: 6098 KPSAKK 6103
>SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26)
Length = 354
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEA-EELFSQFDTDSSGSISLDEFLIKIRP 485
F +D DG+ ++ EFL + + + + + +E F FD D++ SI ++E ++
Sbjct: 259 FLFVDSDGNGAIDFPEFLQLMTKNLQDADPDDTMQETFRVFDRDNNNSIGVEEVQRVLKL 318
Query: 486 PMSESRRNIVEQAFKKLDKTGDGAITIDDIKGVYS 590
+ + VE + D GDG + DD + S
Sbjct: 319 LGQDFKDYEVEAMLQGADYDGDGTVGFDDFSRLMS 353
Score = 33.9 bits (74), Expect = 0.10
Identities = 23/129 (17%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Frame = +3
Query: 216 RAMTQATDPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELN 395
R +++ P+E ++ + S + + F DD+G + E + G +
Sbjct: 188 RDISRTPSPVESVKE-DMELTESQVREIKEAFLVFDDNGDGCITATELKKLVTSLGYNIT 246
Query: 396 KSEAEELFSQF-----DTDSSGSISLDEFLIKIRPPMSES-RRNIVEQAFKKLDKTGDGA 557
++E ++ +Q D+D +G+I EFL + + ++ + +++ F+ D+ + +
Sbjct: 247 EAELMDMMNQIAFLFVDSDGNGAIDFPEFLQLMTKNLQDADPDDTMQETFRVFDRDNNNS 306
Query: 558 ITIDDIKGV 584
I +++++ V
Sbjct: 307 IGVEEVQRV 315
>SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26)
Length = 776
Score = 35.5 bits (78), Expect = 0.033
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL----- 470
+FR D +G ++ EF+ + T + + + F+ +D D +G IS E L
Sbjct: 68 VFRTFDKNGDGTIDFREFICALSVTSRGKLEQKLKWAFNMYDLDGNGYISRQEMLEIVQA 127
Query: 471 ------IKIRPPMSESR-RNIVEQAFKKLDKTGDGAITIDD-IKGVYS 590
++ P ES E+ F+++DK DG +++++ I+G S
Sbjct: 128 IYKMVGSVMKMPEDESTPEKRTEKIFRQMDKNLDGKLSLEEFIEGAKS 175
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 405 AEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAIT 563
AE +F FD + G+I EF+ + ++ AF D G+G I+
Sbjct: 65 AEHVFRTFDKNGDGTIDFREFICALSVTSRGKLEQKLKWAFNMYDLDGNGYIS 117
>SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 191
Score = 35.1 bits (77), Expect = 0.043
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRP 485
+FR D +G ++ EF+ + T + + + FS +D D +G IS E L +R
Sbjct: 68 VFRTFDANGDGTIDFREFICALSVTSRGKLEEKLKWAFSMYDLDGNGYISRQEMLEIVRA 127
Query: 486 -----------PMSESR-RNIVEQAFKKLDKTGDGAITIDD-IKGVYS 590
P ES ++ F+++DK DG +++ + I+G S
Sbjct: 128 IYKMVGSVMKMPEDESTPEKRTDKIFRQMDKNLDGKLSLAEFIEGAKS 175
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +3
Query: 327 DGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRR 506
DGS + + + +YG + +K AE +F FD + G+I EF+ +
Sbjct: 40 DGSLSVEEFKKIYGNFFPYGDASKF-AEHVFRTFDANGDGTIDFREFICALSVTSRGKLE 98
Query: 507 NIVEQAFKKLDKTGDGAIT 563
++ AF D G+G I+
Sbjct: 99 EKLKWAFSMYDLDGNGYIS 117
>SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 190
Score = 35.1 bits (77), Expect = 0.043
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRP 485
+FR D +G ++ EF+ + T + + + FS +D D +G IS E L +R
Sbjct: 68 VFRTFDANGDGTIDFREFICALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVRA 127
Query: 486 -----------PMSESR-RNIVEQAFKKLDKTGDGAITIDD-IKGVYS 590
P ES ++ F+++DK DG +++ + I+G S
Sbjct: 128 IYKMVGSVMKMPEDESTPEKRTDKIFRQMDKNLDGKLSLAEFIEGAKS 175
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 405 AEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAIT 563
AE +F FD + G+I EF+ + ++ AF D G+G I+
Sbjct: 65 AEHVFRTFDANGDGTIDFREFICALSVTSRGKLEQKLKWAFSMYDLDGNGYIS 117
>SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 35.1 bits (77), Expect = 0.043
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 396 KSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAITIDDI 575
K ELF + D D ISL E + I M + R E +++DK DG ++ ++
Sbjct: 78 KQRLRELFPKIDVDQDQKISLKELVEWIDVNMKKHTRKSSESRMEQMDKNKDGKVSWEEY 137
Query: 576 KGV 584
V
Sbjct: 138 VNV 140
>SB_59144| Best HMM Match : efhand (HMM E-Value=0.093)
Length = 240
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSIS 455
F+ D DG + + +F+ GIK++GL+ + E L Q D +S
Sbjct: 69 FQEYDTDGLYKVTRADFVKGIKKSGLQFDIEETARLLKQLDPKKENLVS 117
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 34.3 bits (75), Expect = 0.076
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 381 GLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAI 560
G + + A ELFS D +S G I+ ++ + I V+QAF KLD +G +
Sbjct: 333 GRDTLRERATELFSLCDQESKGYITQNDLVAVITDLELPLDAAQVQQAFSKLDDDQNGYL 392
Query: 561 TIDD 572
T+++
Sbjct: 393 TLEE 396
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLI 473
+F D D + K + L+ + L LN + + +F+Q D D +G ++LDEF++
Sbjct: 428 LFYLCDSDRKGYITKTD-LHRVA-VDLSLNFDQLDLIFNQLDQDGNGRLTLDEFVL 481
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEF---------LYGIKETGL--ELNKSE-AEELFSQFDTDSSGSI 452
F ++DDD + L EEF L G+ G E+ S+ ELF D+D G I
Sbjct: 381 FSKLDDDQNGYLTLEEFTAGFGLFLGLDGVDNDGDLDEIATSDPGRELFYLCDSDRKGYI 440
Query: 453 SLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAITIDD 572
+ + L ++ +S + + + F +LD+ G+G +T+D+
Sbjct: 441 TKTD-LHRVAVDLSLNFDQL-DLIFNQLDQDGNGRLTLDE 478
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +3
Query: 297 LGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIK 476
L IF ++D DG+ L +EF+ G G L+ +E+E D S+G I + L
Sbjct: 459 LDLIFNQLDQDGNGRLTLDEFVLGF---GKFLSGAESE------DEQSNGFIEDQDNLDG 509
Query: 477 IRPPMSESRRNI 512
+ P S+ NI
Sbjct: 510 YQDPSSDVFENI 521
>SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22)
Length = 132
Score = 34.3 bits (75), Expect = 0.076
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 399 SEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAI 560
+E ++FS FD D+SGSI DE +R ++ DK G G I
Sbjct: 3 NEMRDVFSMFDKDNSGSIDTDELRDVMRELGENPSDKEIQDMIADADKDGSGEI 56
>SB_8159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 33.9 bits (74), Expect = 0.10
Identities = 23/91 (25%), Positives = 43/91 (47%)
Frame = +3
Query: 210 SARAMTQATDPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLE 389
S +++T+ T +E+L L + +G G+ + FR D G +++E F +
Sbjct: 33 STQSLTRRT--VEELEELVKDKLTTGFFGVRQAFRANDPRGRGSVSREAFTTILYHLCGY 90
Query: 390 LNKSEAEELFSQFDTDSSGSISLDEFLIKIR 482
++ S L + +S SIS D+F+ R
Sbjct: 91 VSPSLVSSLLQRIGVESPSSISFDDFISHFR 121
>SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 300 GRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKI 479
G +FR D + ++ EF+ G+ +++ F +D+D SG +S E L +
Sbjct: 69 GHVFRTFDKNNDGTIDFNEFIQGLSIISRGSKETKLRWAFEIYDSDGSGEVSKKEMLEIV 128
Query: 480 R 482
R
Sbjct: 129 R 129
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 405 AEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAIT 563
A +F FD ++ G+I +EF+ + S+ + AF+ D G G ++
Sbjct: 68 AGHVFRTFDKNNDGTIDFNEFIQGLSIISRGSKETKLRWAFEIYDSDGSGEVS 120
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 291 LGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEF 467
L L +IF+ +D+D S ++ E +K+ + L + + + D ++ I DEF
Sbjct: 68 LRLEKIFQEIDEDNSGYIDHNEISNALKKLDINLPSRQIDGILKGMDLNNDNRIDFDEF 126
>SB_34261| Best HMM Match : efhand (HMM E-Value=5.3e-14)
Length = 148
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +3
Query: 297 LGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL 470
L R+F D D + + + ++ N+SE E + DT+ G + +EF+
Sbjct: 85 LSRVFNEFDHDSKGYILPSNIRRVLIKFNIDPNESEIEHMMEAADTNEDGKVDFEEFM 142
>SB_38608| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 842
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +3
Query: 303 RIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIR 482
+IF+ D+D S ++ E +KE G L+ S + +++ T G +++D+F+ +
Sbjct: 714 KIFQVFDEDKSGEMDTYELRGALKEAGFTLSNSVLYAVSARYST-GDGKVNVDDFMEIL- 771
Query: 483 PPMSESRRNIVEQAFKK 533
+R NI+ AF+K
Sbjct: 772 -----TRLNILSAAFQK 783
>SB_17840| Best HMM Match : efhand (HMM E-Value=6.3e-18)
Length = 162
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Frame = +3
Query: 318 MDDDGSKLLNKEEFLYGIK--ETGLELNKS-------EAEELFSQFDTDSSGSISLDEFL 470
+D+DG L++ EEF+ ++ E ++ S EA F +FD ++ S+ EF
Sbjct: 59 LDEDGDNLISFEEFVKWLRSEEKFKNIDDSSRYAILCEAVGFFKRFDVSATNSLDRSEFK 118
Query: 471 IKIRPPMSESRRNIVEQAFKKLDKTGDGAIT 563
+ + M ++ +++ FK +D +G I+
Sbjct: 119 M-MMDSMGHKHQDDIDRTFKLIDTHVNGRIS 148
>SB_11953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 405 AEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAIT 563
A +F+ FD + G I EF+ + S ++ AFK D GDG IT
Sbjct: 56 ASFVFNVFDENKDGHIEFREFICALSVTSRGSIDEKLQWAFKLYDLDGDGCIT 108
>SB_22463| Best HMM Match : VWA (HMM E-Value=0)
Length = 1865
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 369 IKETGLELNKSEAEELFSQFDTDSSGS-ISLDEFLIKIRPPMSESRRNIVEQAFKKLD 539
I ETG E K+ A++L S FD S+G+ I+L + + S R +Q K +D
Sbjct: 936 IGETGFEYAKTFAKQLASAFDVSSNGAQIALISYGASAKADFSLKRYKDKDQVLKAID 993
>SB_11457| Best HMM Match : efhand (HMM E-Value=0.0066)
Length = 219
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPP 488
F G L+ +FL I L ++ E F D D + +S DEFL+ I
Sbjct: 56 FASCQAQGQCLMTPADFLESIVHEDLPESRRGIEIAFRMLDKDGNHELSKDEFLVFIE-- 113
Query: 489 MSESRRNIVEQAFKKL 536
S + E++F +L
Sbjct: 114 YSRGMPTVPEESFARL 129
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +3
Query: 435 DSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAITIDDIK 578
D S EFL + S + I AFK +DK GDG IT D+K
Sbjct: 50 DMIASADRTEFLSMMCTVQSGKTQEI-RMAFKSMDKDGDGFITFGDLK 96
>SB_53403| Best HMM Match : efhand (HMM E-Value=2.8e-12)
Length = 146
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL 470
+FR DDD S ++ +EF+ + T + E F +D ++ GSIS E +
Sbjct: 67 VFRTFDDDRSGRIDFKEFMSSLSVTSRGNLDEKLEWAFRIYDINNDGSISRMEMI 121
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 405 AEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAIT 563
A +F FD D SG I EF+ + + +E AF+ D DG+I+
Sbjct: 64 ALHVFRTFDDDRSGRIDFKEFMSSLSVTSRGNLDEKLEWAFRIYDINNDGSIS 116
>SB_31141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 306 IFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEF 467
+F D DGS ++K+E +L+ + E+F++ D D G IS++EF
Sbjct: 13 LFGTCDLDGSGYIDKQELA-----AVCDLDAEDLGEVFNKLDADRDGRISIEEF 61
>SB_11877| Best HMM Match : efhand (HMM E-Value=7.8e-07)
Length = 390
Score = 31.5 bits (68), Expect = 0.53
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 411 ELFSQFDTDSSGSISLDEFLI 473
++F +FDTD+SG +S DEF +
Sbjct: 291 DVFKRFDTDNSGKLSYDEFFL 311
>SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23)
Length = 308
Score = 31.1 bits (67), Expect = 0.71
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = +3
Query: 318 MDDDGSKLLNKEEFLYGIKETGLELN---KSEAEELFSQFDTDSSGSISLDEFLIKIRPP 488
+D D L++ +EFL +E E+ K E ++D + G + E + I P
Sbjct: 195 IDRDKDGLISLKEFLGEYEEEPGEVPDWVKDETNRFNEEYDKNKDGKLDKSEVRLWILPE 254
Query: 489 M-----SESRRNIVEQAFKKLDKTGDGAITIDDIKGVYSV 593
+E +++V A D DG +TI++I+ Y+V
Sbjct: 255 TDHLMAAEEAKHLVSSA----DDNSDGKLTIEEIEKNYAV 290
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = +3
Query: 303 RIFRRMDDDGSKLLNKEEF-LYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKI 479
R F D + L +EE ++ E+ E+++ E D D G ISL EFL +
Sbjct: 153 RRFDAADTNKDGFLTREEMAIFLHPESSPEMSEVHILETIEDIDRDKDGLISLKEFLGEY 212
Query: 480 RPPMSESRRNIVEQAFK---KLDKTGDGAITIDDIK 578
E + ++ + + DK DG + +++
Sbjct: 213 EEEPGEVPDWVKDETNRFNEEYDKNKDGKLDKSEVR 248
>SB_13209| Best HMM Match : LRR_1 (HMM E-Value=1.7e-13)
Length = 489
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 306 IFRRMDDDGS--KLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL 470
+F+R+D++ L + EF G+K + +N ++L DTD G I EF+
Sbjct: 431 LFKRLDENEQFRDSLTRAEFTEGMKRLKV-MNDYYLDKLVEMLDTDGDGEIDYSEFV 486
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Frame = +3
Query: 333 SKLLNKEEFLYGIKETGLELNKSEAEE------LFSQFDTDS---SGSISLDEFLIKIRP 485
++L+ +EF+ GI E E ++ +E LFSQF + S S + K P
Sbjct: 424 TELMRHQEFM-GIMEYLRESIETRPDEMADTSALFSQFSSPSRRRSMQFQASDPRFKSHP 482
Query: 486 PMSESRRNIVEQAFKKLDKTGDGAITIDDIKGVYSVD 596
+ + +VE K + T G+ + ++KG SVD
Sbjct: 483 KLQKLEEIVVEHFKKFAESTSKGSDNLGEVKGKPSVD 519
>SB_42267| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=5.9e-12)
Length = 902
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +3
Query: 309 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFS--QFDTDSSGSISLDEFLI 473
F D + ++ +EFLY ++ L L + +++FS D D++ +S +EF +
Sbjct: 45 FNEWDTNSDGFIDIDEFLYLPGKSDLYLTDEDVKKMFSTLDIDHDNNDKMSFEEFSV 101
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 387 ELNKSEAEELFSQFDTDSSGSISLDEFL 470
E++ + F+++DT+S G I +DEFL
Sbjct: 35 EVSGETTRDTFNEWDTNSDGFIDIDEFL 62
>SB_31565| Best HMM Match : efhand (HMM E-Value=3.4e-06)
Length = 129
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 297 LGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLD 461
LG ++ +D +G L+ EF+ G E K+ ++F +FD +G + L+
Sbjct: 2 LGGLWNLLDVNGDGALDYGEFVRGFIGEMNETRKAYVRKVFHKFDPSKTGLVELN 56
>SB_39288| Best HMM Match : efhand (HMM E-Value=0.00063)
Length = 213
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 354 EFLYGIKETGLELNKSEAE-ELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFK 530
EF + G+ L+ +A +F DT+ G I+L +F R P+S + ++Q F
Sbjct: 51 EFQKVSSKLGMNLDYMKARLGMFVAIDTNRDGLITLTDFARHYRLPISSA----LKQMFS 106
Query: 531 KLDKTGDGAIT 563
LD G +T
Sbjct: 107 ALDPDNKGHVT 117
>SB_49265| Best HMM Match : efhand (HMM E-Value=0.68)
Length = 720
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 303 RIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL 470
++F + + LN E+F + E G+ K A + F FDT+ GS++ L
Sbjct: 329 KVFHKYVSPDASGLNCEQFTSLMSELGIAPQK--ATDFFRAFDTEKEGSVNYKRIL 382
>SB_27812| Best HMM Match : efhand (HMM E-Value=1.7e-07)
Length = 78
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 417 FSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAITIDDIK 578
F +D + I+ DEF +R + R F+ LDK GDGA+T + K
Sbjct: 17 FKFYDKNGDLKITSDEFNHALRVADGSASR-----LFQLLDKNGDGAVTCGEFK 65
>SB_53082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 216 RAMTQ-ATDPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLEL 392
RAM + PL+K ++G L + ++RR+ S L + +F G+K +++
Sbjct: 372 RAMDEHEATPLDKFIHFVRTKG----LRMVDLYRRLTRTDS--LREGDFAKGMKSMDIQM 425
Query: 393 NKSEAEELFSQFDTDSSGSISLDEF 467
+ E ELF D + + EF
Sbjct: 426 GERELRELFRFLDENDDKELQFSEF 450
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +3
Query: 303 RIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSIS 455
+ FR DDD S ++ +E G + E + +FD D G S
Sbjct: 106 KAFRLFDDDDSGKISLRNLRRVARELGENMTDEELRAMIDEFDKDGDGENS 156
>SB_58620| Best HMM Match : XH (HMM E-Value=1.6)
Length = 376
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 366 GIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVE----QAFKK 533
G KE L++ SE EE+ S+ + +++ DEF ++ S+ +E +A K
Sbjct: 15 GSKEVNLDIASSEREEMPSRVFVTRANTLAADEFCRRMSKMASKEDVKTMETLQIKALTK 74
Query: 534 LDKTGD 551
+KT +
Sbjct: 75 FEKTNE 80
>SB_3224| Best HMM Match : efhand (HMM E-Value=0.00096)
Length = 322
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/88 (19%), Positives = 36/88 (40%)
Frame = +3
Query: 303 RIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIR 482
R F +DD G L+ + + G + S+ +LF D G++ + + ++
Sbjct: 230 RAFSCLDDGGDGKLSAKMLRELLTTMGQRMKYSDVTQLFDDVGADQDGNLDYVKLVRLLK 289
Query: 483 PPMSESRRNIVEQAFKKLDKTGDGAITI 566
++ + + + L TG +I I
Sbjct: 290 NGANDQSASHIAGSILALSDTGSASIVI 317
>SB_50259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 713
Score = 28.3 bits (60), Expect = 5.0
Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Frame = +1
Query: 292 WDLEEFSVAWMMMEVNY*TKKNSFMASRKQGWNLIKVKP-KNSSVNSTQTVVA--QSVLM 462
+DL+ + + ++ V + K+ S+ + + +K+K + NST+T++ ++ L+
Sbjct: 542 FDLQLQTKSELLRAVCFAPKRRGEFESKSKAVSPVKLKRFRLDETNSTKTILLSREAELI 601
Query: 463 NSLL--KSV-LPCRNRVVTL*NKHSRSLTRLVTVQSQLMTLK 579
++ + +SV +P N + +L H L + SQL T+K
Sbjct: 602 DTTIDFESVPIPPTNNIASLTGAHLNQLIDITATVSQLSTIK 643
>SB_43413| Best HMM Match : Extensin_2 (HMM E-Value=4.3)
Length = 529
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 301 PSPKIPEAPRDKQSKRSFSRGSV 233
P+P +P +P D + +R FS GSV
Sbjct: 257 PTPAVPTSPDDGERRRVFSFGSV 279
>SB_30172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 701
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +3
Query: 363 YGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDK 542
Y G +N +AE D + L K+R +S +N+ +AF+KLD
Sbjct: 592 YFSNNMGTVMNHPQAE--LPMDDIVPKPNKGLSGITAKLRQKLSGEWKNL-RKAFRKLDL 648
Query: 543 TGDGAITIDDIKGV 584
DG ++I + + V
Sbjct: 649 QNDGYLSIPEFRSV 662
>SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21)
Length = 202
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 411 ELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNI-VEQAFKKLDKTGDGAITIDD 572
+ F FD DSSGSI+ E L I + E+ I ++ +D G+G + D+
Sbjct: 54 DAFEHFDKDSSGSITTRE-LGGIMRSLGENPTEIELQDMINSVDCDGNGLMNFDE 107
>SB_59345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 309 FRRMDDDGSKLLNK-EEFLYGIKETGLELNKSEAEELF-SQFDTDSS 443
F + ++G KL+ K ++ LYG+KE+G NK E L S F+ + S
Sbjct: 770 FEVIFENGEKLVYKLKKSLYGLKESGRNCNKLLHESLMESGFNRNPS 816
>SB_39231| Best HMM Match : zf-C2H2 (HMM E-Value=3.4e-31)
Length = 505
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 562 VIAPSPVLSSFLNACSTMLRRDSDMGGRILIRNSSRLIE 446
++ PSPV+S N DSD+ G+++ NSS L++
Sbjct: 171 ILPPSPVISEH-NELPRADNLDSDLDGQVITCNSSVLLQ 208
>SB_44454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 160 CHATELSISAFT--FGEFS*LKQGSLVSFGAATLPAT 56
CH ELS+S FT FS KQ + TLPAT
Sbjct: 214 CHEEELSLSHFTADMSVFSGSKQVANAGVNLFTLPAT 250
>SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40)
Length = 423
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3
Query: 333 SKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEF 467
++L +K E +KE +EL EE+ + + D+ G++++DEF
Sbjct: 245 TELQSKPEKREEVKEQDIELVLKMIEEIKNIDEHDTVGAVAIDEF 289
>SB_45930| Best HMM Match : efhand (HMM E-Value=4.5e-09)
Length = 176
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 417 FSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAIT 563
F+++DT+ + IS DEF K ES + + F +DK GD AIT
Sbjct: 111 FAEYDTNHNSVISYDEFK-KALGMGDESAKWL----FDAMDKDGDKAIT 154
>SB_28886| Best HMM Match : efhand (HMM E-Value=4.5e-09)
Length = 177
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 417 FSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAIT 563
F+++DT+ + IS DEF K ES + + F +DK GD AIT
Sbjct: 112 FAEYDTNHNSVISYDEFK-KALGMGDESAKWL----FDAMDKDGDKAIT 155
>SB_23016| Best HMM Match : efhand (HMM E-Value=3e-12)
Length = 387
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 429 DTDSSGSISLDEFLIKIRPPMSESRRNIV-EQAFKKLDKTGDGAITIDD 572
D + +S +E+ + P E +++V E+ +DK DG ++++D
Sbjct: 180 DINRDDKLSKEEYTAFLHPEEYEYMKDVVVEETLDDIDKNKDGYVSLED 228
>SB_12096| Best HMM Match : ig (HMM E-Value=9.4e-33)
Length = 942
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 327 DGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDE 464
D KL +EE YG + K EELF D S S+SL +
Sbjct: 64 DNLKLSMEEEEKYGFARQKSGILKRRQEELFEIADIQSPESMSLSQ 109
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 235 LILWRNCACFACPEVLQGSWDLEEF 309
L+L N ACF+ P V+ G W F
Sbjct: 615 LLLIVNLACFSSPSVVLGKWPFSGF 639
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,227,794
Number of Sequences: 59808
Number of extensions: 365448
Number of successful extensions: 1182
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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