Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11h12f
         (614 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051652-1|AAK93076.1|  174|Drosophila melanogaster LD03534p pro...   181   8e-46
AE014134-1534|AAF52690.2|  174|Drosophila melanogaster CG13098-P...   181   8e-46

>AY051652-1|AAK93076.1|  174|Drosophila melanogaster LD03534p
           protein.
          Length = 174

 Score =  181 bits (440), Expect = 8e-46
 Identities = 92/172 (53%), Positives = 120/172 (69%), Gaps = 18/172 (10%)
 Frame = +1

Query: 115 MSWLTSRI--------LSVVWKPTVNVVRTRY------HADKKR---LVRRYGYQEKIWR 243
           MSWL S I        L+V  KP   +  T Y      HA+++     VRRYGY++KI++
Sbjct: 1   MSWLGSMIQKLGRATLLAVGGKPLAPMASTSYTVRQLSHAERRARGPTVRRYGYEDKIFK 60

Query: 244 GGLLPRSE-GKALPIPEYRPDNPWSVRKALFGQNDYIDILGPGNLHPVKTLYNIPSWIRG 420
            GLLP  + G+ LP+P YRP N WS ++ALFGQNDYIDILG   LHPVK LY++PSW+RG
Sbjct: 61  SGLLPHVDNGQKLPMPVYRPKNAWSKKRALFGQNDYIDILGNDRLHPVKVLYSLPSWLRG 120

Query: 421 VSGHEYHILLRKKKMWAKTGTPRLRPTKWKEIQKRLSFLYRKLNRKTKTGPS 576
           VSG+EY +LLRK+K+  K+  P  RPTKW+E++KR+ +LY+ LNRKTKTG S
Sbjct: 121 VSGNEYQVLLRKRKLLEKSKYPIARPTKWREMEKRILYLYKFLNRKTKTGYS 172


>AE014134-1534|AAF52690.2|  174|Drosophila melanogaster CG13098-PA
           protein.
          Length = 174

 Score =  181 bits (440), Expect = 8e-46
 Identities = 92/172 (53%), Positives = 120/172 (69%), Gaps = 18/172 (10%)
 Frame = +1

Query: 115 MSWLTSRI--------LSVVWKPTVNVVRTRY------HADKKR---LVRRYGYQEKIWR 243
           MSWL S I        L+V  KP   +  T Y      HA+++     VRRYGY++KI++
Sbjct: 1   MSWLGSMIQKLGRATLLAVGGKPLAPMASTSYTVRQLSHAERRARGPTVRRYGYEDKIFK 60

Query: 244 GGLLPRSE-GKALPIPEYRPDNPWSVRKALFGQNDYIDILGPGNLHPVKTLYNIPSWIRG 420
            GLLP  + G+ LP+P YRP N WS ++ALFGQNDYIDILG   LHPVK LY++PSW+RG
Sbjct: 61  SGLLPHVDNGQKLPMPVYRPKNAWSKKRALFGQNDYIDILGNDRLHPVKVLYSLPSWLRG 120

Query: 421 VSGHEYHILLRKKKMWAKTGTPRLRPTKWKEIQKRLSFLYRKLNRKTKTGPS 576
           VSG+EY +LLRK+K+  K+  P  RPTKW+E++KR+ +LY+ LNRKTKTG S
Sbjct: 121 VSGNEYQVLLRKRKLLEKSKYPIARPTKWREMEKRILYLYKFLNRKTKTGYS 172


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,057,058
Number of Sequences: 53049
Number of extensions: 557437
Number of successful extensions: 1128
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)