Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11h08f
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.47 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   1.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   1.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.7  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 8/39 (20%), Positives = 20/39 (51%)
 Frame = +1

Query: 157 QVPREYPDDEYYYAPKIQYYYDAPAVNVPEMHDQVQYPY 273
           ++PR+Y   +     ++ Y+ +   +N+   H  + YP+
Sbjct: 178 EIPRDYTASDLEEEHRLAYFREDLGINLHHWHWHLVYPF 216


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +2

Query: 134 CKDGL--CGDKYLGSTPMMNITTLLRYNITTML 226
           C +GL  C  KY  STP+  ITT+L+   + +L
Sbjct: 51  CIEGLRDCPRKY--STPLAKITTILQRYCSVLL 81


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +2

Query: 134 CKDGL--CGDKYLGSTPMMNITTLLRYNITTML 226
           C +GL  C  KY  STP+  ITT+L+   + +L
Sbjct: 47  CIEGLRDCPRKY--STPLAKITTILQRYCSVLL 77


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 252 RPSPIPLLLRP 284
           RP P+P  LRP
Sbjct: 309 RPYPVPFALRP 319


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 511 DYEDKDLEDEEV 546
           DY+++DLED+ V
Sbjct: 181 DYKNEDLEDQPV 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.132    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,348
Number of Sequences: 336
Number of extensions: 2768
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)