Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11h06f
(463 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118976-1|AAM50836.2| 147|Drosophila melanogaster LP01241p pro... 35 0.061
AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine de... 31 0.57
AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-P... 31 0.57
AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-P... 31 0.57
AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-P... 31 0.57
BT003655-1|AAO39659.1| 722|Drosophila melanogaster AT01386p pro... 31 1.00
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 29 3.0
BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p pro... 29 3.0
BT029276-1|ABK30913.1| 251|Drosophila melanogaster IP09812p pro... 29 3.0
AY118512-1|AAM49881.1| 911|Drosophila melanogaster LD14119p pro... 29 3.0
AY089664-1|AAL90402.1| 251|Drosophila melanogaster RH30329p pro... 29 3.0
AE014297-566|AAF54058.3| 251|Drosophila melanogaster CG33323-PA... 29 3.0
AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB... 29 3.0
AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA... 29 3.0
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 29 3.0
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 29 3.0
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 29 3.0
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 29 4.0
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 29 4.0
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 29 4.0
AE013599-560|AAF59155.2| 2482|Drosophila melanogaster CG11198-PA... 29 4.0
AE014296-3399|AAF51628.1| 1088|Drosophila melanogaster CG13251-P... 28 5.3
BT016087-1|AAV36972.1| 749|Drosophila melanogaster LD41296p pro... 28 7.0
AY051669-1|AAK93093.1| 457|Drosophila melanogaster LD22190p pro... 28 7.0
AJ002520-1|CAC20093.1| 749|Drosophila melanogaster DALAO protei... 28 7.0
AF348329-1|AAK31343.1| 749|Drosophila melanogaster Brahma-assoc... 28 7.0
AE014298-1284|AAF46450.1| 749|Drosophila melanogaster CG7055-PA... 28 7.0
BT022525-1|AAY54941.1| 232|Drosophila melanogaster IP06465p pro... 27 9.3
BT001282-1|AAN71038.1| 491|Drosophila melanogaster AT07931p pro... 27 9.3
AY113465-1|AAM29470.1| 151|Drosophila melanogaster RE39820p pro... 27 9.3
AY075288-1|AAL68155.1| 93|Drosophila melanogaster AT30578p pro... 27 9.3
AF038598-1|AAB92621.1| 151|Drosophila melanogaster small nuclea... 27 9.3
AE014297-116|AAF52115.2| 559|Drosophila melanogaster CG12586-PA... 27 9.3
AE013599-1407|AAF58566.1| 151|Drosophila melanogaster CG8427-PA... 27 9.3
>AY118976-1|AAM50836.2| 147|Drosophila melanogaster LP01241p
protein.
Length = 147
Score = 34.7 bits (76), Expect = 0.061
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = -2
Query: 357 SGRCRAVSRDIRTTTEARRPGTARNTRRPK-----PTELSACCRERSETPRHRNKPSRPV 193
S R S TTT + RP TA R P+ PTE S R+R + R R P+R
Sbjct: 37 SPRSAPTSSPRATTTTSTRPATASPPRSPELVETTPTEASRGTRQRVSSSRSRTWPTRTA 96
Query: 192 WSRR 181
S R
Sbjct: 97 TSHR 100
>AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine
decarboxylase antizyme protein.
Length = 254
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 246 SKRSALSASDAECFSLCLGAGPLWWS*CP 332
S S + +E + + LG GPLWWS P
Sbjct: 36 STSSCATTMSSESYRISLGVGPLWWSDVP 64
>AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-PB,
isoform B protein.
Length = 248
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 246 SKRSALSASDAECFSLCLGAGPLWWS*CP 332
S S + +E + + LG GPLWWS P
Sbjct: 30 STSSCATTMSSESYRISLGVGPLWWSDVP 58
>AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-PC,
isoform C protein.
Length = 270
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 246 SKRSALSASDAECFSLCLGAGPLWWS*CP 332
S S + +E + + LG GPLWWS P
Sbjct: 52 STSSCATTMSSESYRISLGVGPLWWSDVP 80
>AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-PA,
isoform A protein.
Length = 254
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 246 SKRSALSASDAECFSLCLGAGPLWWS*CP 332
S S + +E + + LG GPLWWS P
Sbjct: 36 STSSCATTMSSESYRISLGVGPLWWSDVP 64
>BT003655-1|AAO39659.1| 722|Drosophila melanogaster AT01386p
protein.
Length = 722
Score = 30.7 bits (66), Expect = 1.00
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 351 RCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPR 220
RC D+ +T E RPG RR P + C E+ PR
Sbjct: 61 RCPPSGVDLVSTPEHLRPGFRGRARRYNPNDFELTCNEQWRHPR 104
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 401 GXPG*RGXQPRRSTPPG--GAEP*AGTSGPPQRPGAQAQRETLGVRSRQ 261
G PG +G +P PPG G G +GP PG +R +G++ +
Sbjct: 95 GLPGQKG-EPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGER 142
>BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p
protein.
Length = 1374
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 273 PKPTELSACCRERSETPRHRNKPSRPVWSRRS 178
P P L +C R RS H+ S P SRRS
Sbjct: 671 PSPPVLRSCLRNRSLASLHKRSRSSPPSSRRS 702
>BT029276-1|ABK30913.1| 251|Drosophila melanogaster IP09812p
protein.
Length = 251
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 138 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSA 269
S + Y N N + + Q +SG GA +S PG+ S S+
Sbjct: 204 SQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDPGAAASIFSS 247
>AY118512-1|AAM49881.1| 911|Drosophila melanogaster LD14119p
protein.
Length = 911
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 273 PKPTELSACCRERSETPRHRNKPSRPVWSRRS 178
P P L +C R RS H+ S P SRRS
Sbjct: 196 PSPPVLRSCLRNRSLASLHKRSRSSPPSSRRS 227
>AY089664-1|AAL90402.1| 251|Drosophila melanogaster RH30329p
protein.
Length = 251
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 138 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSA 269
S + Y N N + + Q +SG GA +S PG+ S S+
Sbjct: 204 SQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDPGAAASIFSS 247
>AE014297-566|AAF54058.3| 251|Drosophila melanogaster CG33323-PA
protein.
Length = 251
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 138 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSA 269
S + Y N N + + Q +SG GA +S PG+ S S+
Sbjct: 204 SQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDPGAAASIFSS 247
>AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB,
isoform B protein.
Length = 1373
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 273 PKPTELSACCRERSETPRHRNKPSRPVWSRRS 178
P P L +C R RS H+ S P SRRS
Sbjct: 658 PSPPVLRSCLRNRSLASLHKRSRSSPPSSRRS 689
>AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA,
isoform A protein.
Length = 1553
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 273 PKPTELSACCRERSETPRHRNKPSRPVWSRRS 178
P P L +C R RS H+ S P SRRS
Sbjct: 658 PSPPVLRSCLRNRSLASLHKRSRSSPPSSRRS 689
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 401 GXPG*RGXQPRRSTPPG--GAEP*AGTSGPPQRPGAQAQRETLGVRSRQ 261
G PG +G +P PPG G G +GP PG +R +G++ +
Sbjct: 1450 GLPGQKG-EPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGER 1497
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 401 GXPG*RGXQPRRSTPPG--GAEP*AGTSGPPQRPGAQAQRETLGVRSRQ 261
G PG +G +P PPG G G +GP PG +R +G++ +
Sbjct: 1450 GLPGQKG-EPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGER 1497
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 401 GXPG*RGXQPRRSTPPG--GAEP*AGTSGPPQRPGAQAQRETLGVRSRQ 261
G PG +G +P PPG G G +GP PG +R +G++ +
Sbjct: 1450 GLPGQKG-EPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGER 1497
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -3
Query: 401 GXPG*RGXQPRRSTPPG--GAEP*AGTSGPPQRPGAQAQRETLGVR 270
G PG +G +P PPG G G +GP PG +R +G++
Sbjct: 1449 GLPGQKG-EPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQ 1493
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -3
Query: 401 GXPG*RGXQPRRSTPPG--GAEP*AGTSGPPQRPGAQAQRETLGVR 270
G PG +G +P PPG G G +GP PG +R +G++
Sbjct: 1449 GLPGQKG-EPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQ 1493
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -3
Query: 401 GXPG*RGXQPRRSTPPG--GAEP*AGTSGPPQRPGAQAQRETLGVR 270
G PG +G +P PPG G G +GP PG +R +G++
Sbjct: 1449 GLPGQKG-EPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQ 1493
>AE013599-560|AAF59155.2| 2482|Drosophila melanogaster CG11198-PA,
isoform A protein.
Length = 2482
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 126 QLNCSSSISKYYNGNGVD-SVE-TKQVEKVYSGDGASLSAPGSKRSALSASDAE 281
Q N +SSI+K N N +D S+ +K E S D A+ SA G + S L + +
Sbjct: 135 QNNNNSSINKNQNNNSIDISISISKMSETNESNDTAAQSAEGERPSFLVGDEID 188
>AE014296-3399|AAF51628.1| 1088|Drosophila melanogaster CG13251-PA
protein.
Length = 1088
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -3
Query: 383 GXQPRR-STPPGGA-EP*AGTSGPPQRPGAQAQRETLGVRS 267
G P R + PPGGA P G G P PG Q + +T G S
Sbjct: 222 GNGPHRLNNPPGGAGNPPGGGGGAPGPPGCQ-EEDTSGYLS 261
>BT016087-1|AAV36972.1| 749|Drosophila melanogaster LD41296p
protein.
Length = 749
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +1
Query: 331 PAHGS--APPGGVDRRGCXPRYPGHP 402
P HG PPGG R P+Y GHP
Sbjct: 580 PPHGPPPGPPGGPARPYYQPQYGGHP 605
>AY051669-1|AAK93093.1| 457|Drosophila melanogaster LD22190p
protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +1
Query: 331 PAHGS--APPGGVDRRGCXPRYPGHP 402
P HG PPGG R P+Y GHP
Sbjct: 288 PPHGPPPGPPGGPARPYYQPQYGGHP 313
>AJ002520-1|CAC20093.1| 749|Drosophila melanogaster DALAO protein
protein.
Length = 749
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +1
Query: 331 PAHGS--APPGGVDRRGCXPRYPGHP 402
P HG PPGG R P+Y GHP
Sbjct: 580 PPHGPPPGPPGGPARPYYQPQYGGHP 605
>AF348329-1|AAK31343.1| 749|Drosophila melanogaster
Brahma-associated protein 111kD protein.
Length = 749
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +1
Query: 331 PAHGS--APPGGVDRRGCXPRYPGHP 402
P HG PPGG R P+Y GHP
Sbjct: 580 PPHGPPPGPPGGPARPYYQPQYGGHP 605
>AE014298-1284|AAF46450.1| 749|Drosophila melanogaster CG7055-PA
protein.
Length = 749
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +1
Query: 331 PAHGS--APPGGVDRRGCXPRYPGHP 402
P HG PPGG R P+Y GHP
Sbjct: 580 PPHGPPPGPPGGPARPYYQPQYGGHP 605
>BT022525-1|AAY54941.1| 232|Drosophila melanogaster IP06465p
protein.
Length = 232
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -2
Query: 348 CRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKP 205
C V+ R T A T PTE + CC RS P NKP
Sbjct: 171 CHFVNNICRLATSRSATWDANATLASIPTEETKCC--RSAMPNKPNKP 216
>BT001282-1|AAN71038.1| 491|Drosophila melanogaster AT07931p
protein.
Length = 491
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 333 RDIRTTTEARRPGTARNTRRPKPTELSACC-RERSETPRHRNKPSRPVWSRRSP 175
+DIR + A+ R KPTE A R RS +PR ++ P R +RSP
Sbjct: 32 QDIRVEPSTSKDRNAKRDER-KPTEEKAKPKRSRSRSPRRQSPPRR---QQRSP 81
>AY113465-1|AAM29470.1| 151|Drosophila melanogaster RE39820p
protein.
Length = 151
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 368 RSTPPGGAEP*AGTSGPPQRPGAQAQR 288
R PPGG GT GPP PG R
Sbjct: 112 RGGPPGGGR---GTGGPPGAPGGSGGR 135
>AY075288-1|AAL68155.1| 93|Drosophila melanogaster AT30578p
protein.
Length = 93
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 327 IRTTTEARRP-GTARNTRRPKPTELSACCRERSETPRHRNKPSR 199
+RT+T RRP R TR+ KP S RHR++ R
Sbjct: 34 VRTSTSRRRPVHRHRLTRQVKPVRAPLTTNNSSLGSRHRHRMER 77
>AF038598-1|AAB92621.1| 151|Drosophila melanogaster small nuclear
ribonucleoproteinSm D3 protein.
Length = 151
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 368 RSTPPGGAEP*AGTSGPPQRPGAQAQR 288
R PPGG GT GPP PG R
Sbjct: 112 RGGPPGGGR---GTGGPPGAPGGSGGR 135
>AE014297-116|AAF52115.2| 559|Drosophila melanogaster CG12586-PA
protein.
Length = 559
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +1
Query: 298 WAPGLCGGPDVPAHGSAPPGGVDRRGCXPRYPGHP 402
W PG GGP P +G PGG G P PG P
Sbjct: 422 WGPGGPGGPGGP-NGPGGPGGPGGPG-GPGGPGGP 454
>AE013599-1407|AAF58566.1| 151|Drosophila melanogaster CG8427-PA
protein.
Length = 151
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 368 RSTPPGGAEP*AGTSGPPQRPGAQAQR 288
R PPGG GT GPP PG R
Sbjct: 112 RGGPPGGGR---GTGGPPGAPGGSGGR 135
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,419,505
Number of Sequences: 53049
Number of extensions: 423612
Number of successful extensions: 2567
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 2270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2555
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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