Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11h05f
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 147 5e-36
Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical p... 91 4e-19
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.47
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 31 0.82
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p... 27 7.7
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical... 27 7.7
AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p4... 27 7.7
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 147 bits (357), Expect = 5e-36
Identities = 80/178 (44%), Positives = 105/178 (58%), Gaps = 3/178 (1%)
Frame = +3
Query: 72 VGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIAS 248
V DVK+ GL N LAE+++ +G+ S D Q+F +G AP A+ P+V RWY +AS
Sbjct: 2 VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61
Query: 249 YTPAERKTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXX 422
YT AERKTW+ G++P DLFGS
Sbjct: 62 YTDAERKTWASAGGSAPAAAAADGDDF------------DLFGSDDEEEDAEKAKIVEER 109
Query: 423 LKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPV 596
L AYA+KK+KK IAKSS++LDVKPWDDETD+ EME VR+IEM+GL+WG +KL+P+
Sbjct: 110 LAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPI 167
>Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical
protein Y41E3.10a protein.
Length = 263
Score = 91.5 bits (217), Expect = 4e-19
Identities = 43/79 (54%), Positives = 53/79 (67%)
Frame = +3
Query: 360 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 539
DLFGS L AYA KK+ K IAKSS++LDVKPWDDETD+ EME
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198
Query: 540 VRTIEMEGLLWGASKLVPV 596
VR+IEM+GL+WG +KL+P+
Sbjct: 199 VRSIEMDGLVWGGAKLIPI 217
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 261 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 124
QP CM + + VV+ PAP Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical protein
M01F1.7 protein.
Length = 1034
Score = 30.7 bits (66), Expect = 0.82
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +3
Query: 78 DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 257
D + G D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P
Sbjct: 866 DPRVRPGAVDVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEP 925
Query: 258 AERKT 272
++K+
Sbjct: 926 LKQKS 930
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 30.7 bits (66), Expect = 0.82
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +3
Query: 78 DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 257
D + G D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P
Sbjct: 866 DPRVRPGAVDVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEP 925
Query: 258 AERKT 272
++K+
Sbjct: 926 LKQKS 930
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 261 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 124
QP CM + + VV+ PA Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171
>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 216 HVLRWYNQIASYTPAERKTWSQGTSP 293
H+L +Q+ S TPA W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549
>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 216 HVLRWYNQIASYTPAERKTWSQGTSP 293
H+L +Q+ S TPA W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549
>AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p450
family protein 25A5 protein.
Length = 477
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 96 GLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPA 203
G+N LNQ L + +Y +G+ +++ V GK A
Sbjct: 93 GMNQLNQSLLQNTYATGWKHTRSAVAPIFSTGKMKA 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,557,432
Number of Sequences: 27780
Number of extensions: 236926
Number of successful extensions: 708
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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