Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11h04f
         (605 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XQC9 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  
UniRef50_Q05FG4 Cluster: Putative uncharacterized protein; n=1; ...    34   2.3  
UniRef50_Q9KB83 Cluster: BH2045 protein; n=1; Bacillus haloduran...    34   3.0  
UniRef50_UPI0000498DDD Cluster: hypothetical protein 26.t00058; ...    32   9.2  
UniRef50_Q9DW47 Cluster: Pr149; n=1; Rat cytomegalovirus Maastri...    32   9.2  

>UniRef50_Q4XQC9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 67

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 18/38 (47%), Positives = 25/38 (65%)
 Frame = -3

Query: 135 TEKKTIHKQAKIQLFK**ISEKYFLINIYLHTVYKRNK 22
           T +K I K+  + +F    S KYFL NIYL+ ++KRNK
Sbjct: 10  TWRKYIKKKYDMHIFS---SYKYFLKNIYLYVIWKRNK 44


>UniRef50_Q05FG4 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Carsonella ruddii PV|Rep: Putative
           uncharacterized protein - Carsonella ruddii (strain PV)
          Length = 402

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +2

Query: 47  K*MFIKKYFSLIYYLNN*IFACL*IVFFSVVVELSQRKKVLQIEFYC*EINFSILITIY 223
           K +  K  F L+YY     +A +  +F+  ++ + Q+KK L +  YC + N +I   IY
Sbjct: 11  KKIIYKNDFFLVYYKFKFFYAKIKCLFYLNLINVKQKKKFLNLITYCKKKNINIFKKIY 69


>UniRef50_Q9KB83 Cluster: BH2045 protein; n=1; Bacillus
           halodurans|Rep: BH2045 protein - Bacillus halodurans
          Length = 558

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -3

Query: 579 FGNKSYP*CRYYSQQLNKH---YFRASITYARIEDLARKSILFRQATYMDK 436
           F    YP   +YSQ+  KH   Y      + ++  L+  S+LF + TY+DK
Sbjct: 364 FRENDYPTALHYSQEAFKHIKAYQGGDALHLKVNVLSNLSVLFEEMTYVDK 414


>UniRef50_UPI0000498DDD Cluster: hypothetical protein 26.t00058;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 26.t00058 - Entamoeba histolytica HM-1:IMSS
          Length = 188

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -3

Query: 429 IQTAQSIIFENR*DTEFLKHY*ALIFILIFPKAYFSHLIFYI 304
           I T   + FEN   T +LK+Y  +IFIL+ P  + S   F+I
Sbjct: 49  IPTNAKLRFENNIIT-YLKYYIVIIFILLLPSEFLSFKFFFI 89


>UniRef50_Q9DW47 Cluster: Pr149; n=1; Rat cytomegalovirus
           Maastricht|Rep: Pr149 - Rat cytomegalovirus (strain
           Maastricht)
          Length = 380

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 517 PSVHYLRAHRRFGQKINTFQTGNIHG*GVYTNCTVYH 407
           P + YLR+H  + QKI     G     G+ +NCT  H
Sbjct: 81  PEIRYLRSHEEYLQKIRVALDGYTGTLGIRSNCTYDH 117


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,224,989
Number of Sequences: 1657284
Number of extensions: 9163581
Number of successful extensions: 17793
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17790
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)