Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11h03r
         (753 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...    52   6e-07
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...    52   6e-07
Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z81017-8|CAC70094.2|  988|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.       28   6.2  
AY288941-1|AAP44084.1|  987|Caenorhabditis elegans EGL-15 protein.     28   6.2  

>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = -2

Query: 752 YKDSTLIMQLLRDNLTLWTSDMQGDGESADAEQK 651
           YKDSTLIMQLLRDNLTLWTSD+  + +  +  Q+
Sbjct: 212 YKDSTLIMQLLRDNLTLWTSDVGAEDQEQEGNQE 245


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = -2

Query: 752 YKDSTLIMQLLRDNLTLWTSDMQGDGESADAEQK 651
           YKDSTLIMQLLRDNLTLWTSD+  + +  +  Q+
Sbjct: 212 YKDSTLIMQLLRDNLTLWTSDVGAEDQEQEGNQE 245


>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 23/30 (76%), Positives = 24/30 (80%)
 Frame = -2

Query: 752 YKDSTLIMQLLRDNLTLWTSDMQGDGESAD 663
           YKDSTLIMQLLRDNLTLWTSD   D   A+
Sbjct: 213 YKDSTLIMQLLRDNLTLWTSDAATDDTDAN 242


>Z81017-8|CAC70094.2|  988|Caenorhabditis elegans Hypothetical
           protein F58A3.2b protein.
          Length = 988

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -1

Query: 228 RTIGSRNVVLG*GYALEEVFIERAEDVRSNTFHRRRSG*R 109
           R + +RNV++G G+ L+      + DV  N ++R+R   R
Sbjct: 744 RDLAARNVLVGDGHVLKISDFGLSRDVHCNDYYRKRGNGR 783


>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
           protein F58A3.2a protein.
          Length = 1040

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -1

Query: 228 RTIGSRNVVLG*GYALEEVFIERAEDVRSNTFHRRRSG*R 109
           R + +RNV++G G+ L+      + DV  N ++R+R   R
Sbjct: 796 RDLAARNVLVGDGHVLKISDFGLSRDVHCNDYYRKRGNGR 835


>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
          Length = 1040

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -1

Query: 228 RTIGSRNVVLG*GYALEEVFIERAEDVRSNTFHRRRSG*R 109
           R + +RNV++G G+ L+      + DV  N ++R+R   R
Sbjct: 796 RDLAARNVLVGDGHVLKISDFGLSRDVHCNDYYRKRGNGR 835


>AY288941-1|AAP44084.1|  987|Caenorhabditis elegans EGL-15 protein.
          Length = 987

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -1

Query: 228 RTIGSRNVVLG*GYALEEVFIERAEDVRSNTFHRRRSG*R 109
           R + +RNV++G G+ L+      + DV  N ++R+R   R
Sbjct: 743 RDLAARNVLVGDGHVLKISDFGLSRDVHCNDYYRKRGNGR 782


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,305,265
Number of Sequences: 27780
Number of extensions: 266361
Number of successful extensions: 769
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)