Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11h02r
(600 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9FLJ9 Cluster: Arabidopsis thaliana genomic DNA, chrom... 36 0.73
UniRef50_Q97JY8 Cluster: Phage related protein, YonF B.subtilis ... 34 2.2
UniRef50_A1ZS05 Cluster: Outer membrane protein, OMP85 family, p... 34 2.9
UniRef50_Q950Z2 Cluster: Ymf77; n=3; cellular organisms|Rep: Ymf... 34 2.9
UniRef50_Q057G2 Cluster: DNA polymerase III, d subunit; n=1; Buc... 33 3.9
UniRef50_UPI0000F20062 Cluster: PREDICTED: hypothetical protein;... 33 5.1
UniRef50_A5G4Q4 Cluster: Polysaccharide biosynthesis protein; n=... 33 5.1
UniRef50_A0M0D6 Cluster: Two-component system response regulator... 33 5.1
UniRef50_O51196 Cluster: Putative uncharacterized protein BB0174... 33 6.8
UniRef50_Q6E795 Cluster: Sec-independent transporter protein; n=... 33 6.8
>UniRef50_Q9FLJ9 Cluster: Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MFB13; n=4; core
eudicotyledons|Rep: Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MFB13 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 359
Score = 35.9 bits (79), Expect = 0.73
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +3
Query: 417 KLISSN-SLQTLKTFFIHLLKTYTC-FFFLIPS*FPSAAAYNFSLYLLVF 560
KL+S+N S + F++ LLKTY C FFFL+ SA A F+L+ L +
Sbjct: 141 KLLSNNHSADSSSVFYLRLLKTYVCNFFFLL-----SANASAFALFFLAY 185
>UniRef50_Q97JY8 Cluster: Phage related protein, YonF B.subtilis
homolog; n=1; Clostridium acetobutylicum|Rep: Phage
related protein, YonF B.subtilis homolog - Clostridium
acetobutylicum
Length = 589
Score = 34.3 bits (75), Expect = 2.2
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 208 IIHLSKPDKNKNKNITIHTLKFLSNH 285
II K D KN+N+ +HTL FL NH
Sbjct: 451 IISAIKADNKKNENMAVHTLLFLENH 476
>UniRef50_A1ZS05 Cluster: Outer membrane protein, OMP85 family,
putative; n=1; Microscilla marina ATCC 23134|Rep: Outer
membrane protein, OMP85 family, putative - Microscilla
marina ATCC 23134
Length = 843
Score = 33.9 bits (74), Expect = 2.9
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = +3
Query: 372 QQNQYFLHSRGCKHKKLISSNSLQTLKTFFIHLLKTYTCFFFLIPS*FPSAAAYNFSL 545
++ QYFL S+ K K +SS++L+ L KT T F F +PS AAYN+ L
Sbjct: 28 KKGQYFLRSQDIKGNKKLSSSNLEAL-----FRQKTNTRFLFG----YPSVAAYNYGL 76
>UniRef50_Q950Z2 Cluster: Ymf77; n=3; cellular organisms|Rep: Ymf77
- Tetrahymena thermophila
Length = 1321
Score = 33.9 bits (74), Expect = 2.9
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +1
Query: 115 IKKKNIVILVTYKSF*K---HDGNLSYTLISIGEIIHLSKPDKNKNKNITIHTLKFLSNH 285
I+KKN ++L+T F +D L I I E +LS K KN I+ + F+
Sbjct: 91 IRKKNYIVLITIIDFIYDVIYDIKLKINDIKIIEKFNLSN-KKKKNLKEKINNIIFIFIR 149
Query: 286 LVKKTKIEIQFGL*IIN-*YLVLFIELFDYNRTN 384
++ I++ L IN YL+L L+ YN+ N
Sbjct: 150 ILWYLWFNIKYVLNFINYLYLILLRYLYIYNKIN 183
>UniRef50_Q057G2 Cluster: DNA polymerase III, d subunit; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep: DNA
polymerase III, d subunit - Buchnera aphidicola subsp.
Cinara cedri
Length = 330
Score = 33.5 bits (73), Expect = 3.9
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = -1
Query: 522 PMETKMELKKKNMYTFLINE*KMFLTSVMNLKILI 418
P+ K ++KK+N++TF+I E K FL + N KI++
Sbjct: 5 PINLKKKIKKRNIFTFIILESKYFLIKI-NKKIIL 38
>UniRef50_UPI0000F20062 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 317
Score = 33.1 bits (72), Expect = 5.1
Identities = 21/90 (23%), Positives = 41/90 (45%)
Frame = +1
Query: 85 VKKTCFYLHNIKKKNIVILVTYKSF*KHDGNLSYTLISIGEIIHLSKPDKNKNKNITIHT 264
V + C H + V +V +F + N +++I I++LS P + +
Sbjct: 4 VTRQCSVAHTRYQSRSVSVVDTPAFLEPQINRDELVMNIASIVYLSSPGAHAFLIVFPVN 63
Query: 265 LKFLSNHLVKKTKIEIQFGL*IIN*YLVLF 354
++F L +IE+ FG ++N ++LF
Sbjct: 64 MRFTKRELQIPQQIELMFGEGVLNHCIILF 93
>UniRef50_A5G4Q4 Cluster: Polysaccharide biosynthesis protein; n=1;
Geobacter uraniumreducens Rf4|Rep: Polysaccharide
biosynthesis protein - Geobacter uraniumreducens Rf4
Length = 452
Score = 33.1 bits (72), Expect = 5.1
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = -2
Query: 362 NSINKTRY*LIIYNPN--CISILVF----FTKWLLRNFNV*IVMFLFLFLSGLLKCIIS 204
NSIN Y L I C + VF F WL ++FN IV + L G L CI++
Sbjct: 312 NSINAKAYKLTILGGTITCALVYVFAELIFRLWLSKSFNAEIVTCFRIMLGGTLACIVT 370
>UniRef50_A0M0D6 Cluster: Two-component system response regulator
containing LytTR DNA-binding domain; n=11;
Bacteroidetes|Rep: Two-component system response
regulator containing LytTR DNA-binding domain - Gramella
forsetii (strain KT0803)
Length = 237
Score = 33.1 bits (72), Expect = 5.1
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 118 KKKNIVILVTYKSF*KHDGNLSYTLISIGEIIHLSKPDKNKNKNITIHTLKF-LSNHLVK 294
+K N V+L T KSF + N + I++L K ++ +KNI I K LS H K
Sbjct: 167 EKDNFVVLATMKSFEEQLPNERFLRTHKSYIVNLEKIERYNSKNIEIDKQKLPLSRH--K 224
Query: 295 KTKI 306
KT +
Sbjct: 225 KTNL 228
>UniRef50_O51196 Cluster: Putative uncharacterized protein BB0174;
n=4; Borrelia burgdorferi group|Rep: Putative
uncharacterized protein BB0174 - Borrelia burgdorferi
(Lyme disease spirochete)
Length = 301
Score = 32.7 bits (71), Expect = 6.8
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +1
Query: 136 ILVTYKSF*KHDGNLSYTLISIGEIIHLSKPDKNKNKNITIHTLKFLSNHLVKKTK-IEI 312
I+V + SF + G+ S I IG++I K +K KNI I+T K +SN+ K K IE
Sbjct: 80 IIVNFVSF--YIGSSSLPSIYIGDVISNGKKNKVILKNIKINTDKLVSNNSDFKIKNIEG 137
Query: 313 QFGL*IIN*YLVLFI 357
+ + YL LFI
Sbjct: 138 VLFIPGTSTYLFLFI 152
>UniRef50_Q6E795 Cluster: Sec-independent transporter protein; n=1;
Saprolegnia ferax|Rep: Sec-independent transporter
protein - Saprolegnia ferax
Length = 244
Score = 32.7 bits (71), Expect = 6.8
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 347 FYLLNCLITTEPIFFAFQRLQTQKINIFKFI-TDVKNIFYSFIKNVYMFFFFNSILVSI 520
F LNC T+ + + F + ++ FI T++ +IF I N Y+ FFF SIL+SI
Sbjct: 28 FIFLNCSFFTDQLIYIFIKPLLNITHLKYFIYTEITDIF---ILNFYLSFFF-SILISI 82
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,925,169
Number of Sequences: 1657284
Number of extensions: 10514236
Number of successful extensions: 25950
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 24453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25928
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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