Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11h02r
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.0  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   6.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   6.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.0  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   6.0  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   6.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.9  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 450 KTFFIHLLKTYTCFFFLIP 506
           K   IHLL+ Y C F L P
Sbjct: 270 KRKLIHLLQEYRCIFSLRP 288


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +2

Query: 413  QKINIFKFITDVKNIFYSFIKNVYMFFFFNSILVSIGGCVQL 538
            +K  I K + +++N      K+V+ FF FN++ V +   +QL
Sbjct: 1253 EKARIAKELIELRN------KSVFAFFMFNALFVLVVFLLQL 1288


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +2

Query: 413  QKINIFKFITDVKNIFYSFIKNVYMFFFFNSILVSIGGCVQL 538
            +K  I K + +++N      K+V+ FF FN++ V +   +QL
Sbjct: 1253 EKARIAKELIELRN------KSVFAFFMFNALFVLVVFLLQL 1288


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = -3

Query: 328 FTTQTVFL---FWFFLPSGC*GTLMYELLCFYFYFCPAYSNV*SHQY*SMCKISFHRAFK 158
           FT   +FL   ++F +P       ++ LLC Y+++C A+     H    +C   F  AF 
Sbjct: 123 FTVHLLFLLCIYYFVVP-------LFFLLCIYYFYC-AFIIFTVHLLFLLCIYHFFCAFI 174

Query: 157 NFCK*QVSQCFF 122
            F    +  C F
Sbjct: 175 IFTMHLLFCCAF 186



 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = +3

Query: 456 FFIHLLKTYTCFFFLIPS*FPSAAAYNFSLYLL 554
           F +HLL     ++F++P  F     Y +  +++
Sbjct: 123 FTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFII 155



 Score = 21.0 bits (42), Expect = 7.9
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 256 LLCFYFYFC 230
           LLC Y+++C
Sbjct: 282 LLCIYYFYC 290


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 449 KNIFYSFIKNVYMFF 493
           KN+ +S I NV M+F
Sbjct: 745 KNLIFSLIANVAMYF 759


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 24  YTETIWVCT 50
           Y ET W+CT
Sbjct: 88  YLETTWICT 96


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 428 FKFITDVKNIFYSFIKNVYMFFFF 499
           F+F+  V NIF +F+  ++    F
Sbjct: 66  FRFVYAVYNIFGAFVMGLFCILKF 89


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 420 LISSNSLQTLKTFFIHLLKTYTCFFFL 500
           LIS   +Q + T  + LL+    FFFL
Sbjct: 67  LISGFQMQKIATKGLDLLEANRLFFFL 93


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 24  YTETIWVCT 50
           Y ET W+CT
Sbjct: 106 YLETTWICT 114


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 420 LISSNSLQTLKTFFIHLLKTYTCFFFL 500
           LIS   +Q + T  + LL+    FFFL
Sbjct: 67  LISGFQMQKIATKGLDLLEANRLFFFL 93


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 332 LTNI*FYLLNCLITTE-PIFFAFQRLQTQKINIFKFITDVK 451
           L +I F +    IT + PI+     ++T K+N+FK I ++K
Sbjct: 378 LRDIIFAIRQHAITAKFPIYLYRMSVET-KLNVFKRIGNIK 417


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 332 LTNI*FYLLNCLITTE-PIFFAFQRLQTQKINIFKFITDVK 451
           L +I F +    IT + PI+     ++T K+N+FK I ++K
Sbjct: 380 LRDIIFAIRQHAITAKFPIYLYRMSVET-KLNVFKRIGNIK 419


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 394 CKKYWFCCNQT 362
           C +YW C N T
Sbjct: 112 CTRYWTCWNGT 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,225
Number of Sequences: 336
Number of extensions: 3567
Number of successful extensions: 22
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)