Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g15r
         (765 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC085610-1|AAH85610.1|  578|Homo sapiens ZFHX4 protein protein.        31   4.5  
BC074736-1|AAH74736.2|  332|Homo sapiens ZFHX4 protein protein.        31   4.5  
BC047745-1|AAH47745.2|  507|Homo sapiens ZFHX4 protein protein.        31   4.5  
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain...    31   4.5  
AK131462-1|BAD18607.1| 1103|Homo sapiens protein ( Homo sapiens ...    31   4.5  
AK024633-1|BAB14939.1|  324|Homo sapiens protein ( Homo sapiens ...    31   4.5  
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain...    31   4.5  
BC037428-1|AAH37428.1|  606|Homo sapiens RAVER1 protein protein.       31   6.0  
AK222984-1|BAD96704.1|  292|Homo sapiens tetratricopeptide repea...    30   7.9  

>BC085610-1|AAH85610.1|  578|Homo sapiens ZFHX4 protein protein.
          Length = 578

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 441 NVLIFISCFC-SS*LDVARSWSSQRVAAPPWSPRSASLPST 560
           N    +SCF   S  ++    S++R A+PP SP S SLPST
Sbjct: 475 NTYPHLSCFSMKSWPNILFQASARRAASPPSSPPSLSLPST 515


>BC074736-1|AAH74736.2|  332|Homo sapiens ZFHX4 protein protein.
          Length = 332

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 441 NVLIFISCFC-SS*LDVARSWSSQRVAAPPWSPRSASLPST 560
           N    +SCF   S  ++    S++R A+PP SP S SLPST
Sbjct: 229 NTYPHLSCFSMKSWPNILFQASARRAASPPSSPPSLSLPST 269


>BC047745-1|AAH47745.2|  507|Homo sapiens ZFHX4 protein protein.
          Length = 507

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 441 NVLIFISCFC-SS*LDVARSWSSQRVAAPPWSPRSASLPST 560
           N    +SCF   S  ++    S++R A+PP SP S SLPST
Sbjct: 404 NTYPHLSCFSMKSWPNILFQASARRAASPPSSPPSLSLPST 444


>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
            protein protein.
          Length = 3567

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 441  NVLIFISCFC-SS*LDVARSWSSQRVAAPPWSPRSASLPST 560
            N    +SCF   S  ++    S++R A+PP SP S SLPST
Sbjct: 3464 NTYPHLSCFSMKSWPNILFQASARRAASPPSSPPSLSLPST 3504


>AK131462-1|BAD18607.1| 1103|Homo sapiens protein ( Homo sapiens cDNA
            FLJ16624 fis, clone TESTI4015442, moderately  similar to
            Mus musculus zinc finger homeodomain 4 (Zfh4-pending). ).
          Length = 1103

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 441  NVLIFISCFC-SS*LDVARSWSSQRVAAPPWSPRSASLPST 560
            N    +SCF   S  ++    S++R A+PP SP S SLPST
Sbjct: 1000 NTYPHLSCFSMKSWPNILFQASARRAASPPSSPPSLSLPST 1040


>AK024633-1|BAB14939.1|  324|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ20980 fis, clone ADSU01986. ).
          Length = 324

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 441 NVLIFISCFC-SS*LDVARSWSSQRVAAPPWSPRSASLPST 560
           N    +SCF   S  ++    S++R A+PP SP S SLPST
Sbjct: 221 NTYPHLSCFSMKSWPNILFQASARRAASPPSSPPSLSLPST 261


>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
            protein 4 protein.
          Length = 3599

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 441  NVLIFISCFC-SS*LDVARSWSSQRVAAPPWSPRSASLPST 560
            N    +SCF   S  ++    S++R A+PP SP S SLPST
Sbjct: 3496 NTYPHLSCFSMKSWPNILFQASARRAASPPSSPPSLSLPST 3536


>BC037428-1|AAH37428.1|  606|Homo sapiens RAVER1 protein protein.
          Length = 606

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 513 VAAPPWSPRSASLPSTCPRTS 575
           V+ P W+ R+A+LP+ CPR S
Sbjct: 563 VSRPHWAARNAALPTCCPRPS 583


>AK222984-1|BAD96704.1|  292|Homo sapiens tetratricopeptide repeat
           domain 1 variant protein.
          Length = 292

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -1

Query: 717 EKIMRDLQQAFVEDPNEFKVENTSPEKL-KAELSAE-AVKIEKNV 589
           E+   D + +F E+P   KVEN S E +  +EL  E  +++EKN+
Sbjct: 60  EECFHDCRASFEEEPGADKVENKSNEDVNSSELDEEYLIELEKNM 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,855,592
Number of Sequences: 237096
Number of extensions: 1570801
Number of successful extensions: 3414
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3413
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)