Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g15f
         (577 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7E6F Cluster: PREDICTED: hypothetical protein;...    89   5e-17
UniRef50_A4CDR0 Cluster: ABC transporter, permease protein; n=1;...    35   1.2  
UniRef50_Q8IBJ1 Cluster: Ubiquitin carboxyl-terminal hydrolase, ...    34   2.8  
UniRef50_Q24FT4 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_A1HSH9 Cluster: Putative uncharacterized protein; n=1; ...    32   8.4  
UniRef50_A0C392 Cluster: Chromosome undetermined scaffold_146, w...    32   8.4  

>UniRef50_UPI0000DB7E6F Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 218

 Score = 89.4 bits (212), Expect = 5e-17
 Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 20/119 (16%)
 Frame = +1

Query: 280 SERAIPHLRDIFGLSQQYD-------------------GNCKNFDEN-EXXXXXXXXXXX 399
           ++R IPHLRDIFG   +++                   G+    +E+ +           
Sbjct: 7   ADRNIPHLRDIFGFGNKWENTRLQVEEKAPGHDSAVSIGSTSGEEESPKNSKKKKSRRRD 66

Query: 400 XYRTYGNGDVKTLERHLSMKKTIRKKIMRDLQQAFVEDPNEFKVENTSPEKLKAELSAE 576
             +T    DVK LERHLSMKKTIRKKIMRDLQQAFVEDPNEF+V++  PE+LKAE++ +
Sbjct: 67  NSKTLTETDVKHLERHLSMKKTIRKKIMRDLQQAFVEDPNEFRVDDIPPEQLKAEINIQ 125


>UniRef50_A4CDR0 Cluster: ABC transporter, permease protein; n=1;
           Pseudoalteromonas tunicata D2|Rep: ABC transporter,
           permease protein - Pseudoalteromonas tunicata D2
          Length = 808

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 22/73 (30%), Positives = 41/73 (56%)
 Frame = -2

Query: 513 VLNERLLKVAHYLFPNSLLHTEVSL*RLDVAITVRAIVIFFLLSLFGGVFIFIEILAVAV 334
           VL+   ++++H  F N L+ + +S   L+ ++ + AI+I  ++ LF GV+  + +  V V
Sbjct: 346 VLSLAFVELSHDYF-NQLVESHISF-VLNKSMVLMAILITLVIGLFNGVYAGLVVANVDV 403

Query: 333 ILLAETEYVPQMG 295
            LL  T Y   +G
Sbjct: 404 KLLVRTHYQYHLG 416


>UniRef50_Q8IBJ1 Cluster: Ubiquitin carboxyl-terminal hydrolase,
            putative; n=2; Eukaryota|Rep: Ubiquitin carboxyl-terminal
            hydrolase, putative - Plasmodium falciparum (isolate 3D7)
          Length = 3183

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 60   KQKTKKKTVAFYNKNTCCAPNNKNRWILFDIHGYTR 167
            KQ+ K KT  + N+N C + N K+ +I  D   YTR
Sbjct: 1987 KQEEKNKTNMYLNQNACTSKNEKDVYIYNDDQDYTR 2022


>UniRef50_Q24FT4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1215

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -2

Query: 210 YMENSCRKFSNLFFVACNRECQTKSSGFCYSEHSTYFCYKMQ 85
           Y+++S   F+N+    C+  CQ  ++  C   +STY+ Y  Q
Sbjct: 427 YIKSSSFNFTNILLKKCSSNCQECNASGCVKCNSTYYLYNSQ 468


>UniRef50_A1HSH9 Cluster: Putative uncharacterized protein; n=1;
           Thermosinus carboxydivorans Nor1|Rep: Putative
           uncharacterized protein - Thermosinus carboxydivorans
           Nor1
          Length = 168

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
 Frame = +3

Query: 93  YNKNTCCAPNNKNRWILFDIHGYTRRRRDLKTSGSYFPYRSHDEVF--VISTRKWERRVR 266
           Y KN       KN +++  + GY R  R  +       Y  HD  F   + TRK  R+ R
Sbjct: 70  YRKNDNAHVEQKNGFLVRQLVGYERYDRPEQVEWLNSIYALHDLYFNYCLPTRKLIRKER 129

Query: 267 CHHDVR----TSDTPSAGHIRSQPTI*RQLQEFR 356
           C   V+    T+ TP+   I +   +  Q+Q+ +
Sbjct: 130 CGGRVKKTFDTARTPATRLIETNALLPEQIQKLK 163


>UniRef50_A0C392 Cluster: Chromosome undetermined scaffold_146,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_146,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 554

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +1

Query: 406 RTYGNGDVKTLERHLSMKKTIRKKIMRDLQQAFVEDPNEFKVENTSP 546
           R+Y  GDV  L      K  + K+   DLQQ F+E+  E ++ + SP
Sbjct: 220 RSYRMGDVVYLSGESVNKIYLIKEGAVDLQQVFIEEKEELEIRSVSP 266


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,240,812
Number of Sequences: 1657284
Number of extensions: 10308932
Number of successful extensions: 27564
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27557
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)